KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112215318
Entry
112215318         CDS       T05605                                 
Symbol
top1mt
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:otw03032]
    112215318 (top1mt)
Enzymes [BR:otw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     112215318 (top1mt)
DNA replication proteins [BR:otw03032]
 Eukaryotic type
  DNA Topoisomerases
   112215318 (top1mt)
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc Hanta_nucleocap
Other DBs
NCBI-GeneID: 112215318
NCBI-ProteinID: XP_024230019
Position
LG16:complement(11498656..11514803)
AA seq 871 aa
MSSQSHRECNGHDCELRTRTTLFTVMKLEDNEGHGGAETSSRKRTASESKIDESPTDRKR
SKDGERDKKEETELKHKSKHSSSKHPRKPLQEPKITSSGGLKAVSENDHADVKTKSVAMD
ASLPSEKNTIDLNNNISAKHTESDERKVTKTELQEVDLFAPIEHSDMERSDKKSKKTGDS
QKDNKHKHKSKSSKKGHHGTDERNPEQRKVGEISANSSDGNSKKRKSKDSCETDVLPTGD
SKKETAIKKENAKKEREKKDRSGKDTKTTDEKKRKNKPEGKEESKKKKKDGDDGKTKKGG
KKEGEDSTWKWWEEGNSNNGNKWTTLEHKGPLFPPEYEPLPNNVSFFYNGNPVKLTLPAE
EVATFYAKMLDHEYTTKSSFQENFFTDWREEMSVEEREQIKKLSKCDFTHINKYFLDKSE
EKKAMTKEQKQVLKEENNKLTEEYGFCELDGHREKIGNFRVEPPGLFRGRGEHPKMGKLK
KRIQPEEITINCSKGSNIPVAPKGHRWRKVQHDNTVTWLASWVENVQGNFKYVMLNPSSK
LKGEKDWQKYEVARKLKLKVETIRRLYREDWKNREMKTRQRGVALYFIDKLALRAGNEKE
ESETADTVGCCSLRVEHITLHQEKGGQEFMVEFDFLGKDSIRYYNEVPVEGRVFKNLKLF
MENKEPEDDLFDRINTTYLNKHLNQSMPGLTAKVFRTFNASTTLQEQLNKLTTADMSLEE
KLLSYNRANRAVAILCNHQRAAPKTFEKSMQNLQDKVAQKQQQLDVARKELKDAKKEHKR
GGTERTRKLVEKKEAVVKRLEEQLKKLQLQMTDREENKVIALGTSKLNYLDPRISVAWCR
KFNVPIEKIYNKTQRDKFAWAIDMTEEDFQF
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgagttctcaatctcatcgagagtgtaatgggcacgattgtgaattgagaacacggaca
actctgtttacagtgatgaaactggaagacaatgaaggacatggaggggctgaaacatcc
agcaggaaaagaacagcatcagagtctaagattgatgagagcccaacagaccggaagagg
agtaaggatggggaaagggacaaaaaagaggaaaccgagctgaagcacaagtcgaagcac
tccagttctaagcatcctcgtaaacctctgcaggagccgaagatcacaagttctgggggc
ttaaaagctgtctcggagaatgaccatgcagatgtgaagaccaaaagtgtagccatggat
gcatcactaccttctgaaaagaacaccattgacttaaacaacaatatctctgccaagcac
acggaatcagatgagaggaaagtgaccaagactgagttacaggaagttgacttgtttgca
ccaattgagcattcagatatggagaggtctgacaaaaaatcaaagaaaactggggattca
caaaaagataacaaacacaagcacaaatctaaaagtagcaaaaagggacaccacgggaca
gacgagagaaatcctgagcagagaaaagttggggaaatatcagctaacagttccgatggc
aactctaaaaagaggaagagcaaagattcatgtgaaactgatgttctaccgacaggtgac
agtaaaaaagaaactgccataaaaaaggagaatgccaagaaagaaagggagaaaaaagat
agaagtggtaaagacacaaagacaaccgatgaaaagaaacgtaaaaataagccagaggga
aaagaggaatctaagaagaagaaaaaagatggagatgatgggaagaccaagaagggtggg
aaaaaagaaggggaggacagtacatggaaatggtgggaggaaggtaattccaacaacggg
aacaaatggaccacgttggaacacaaaggtccacttttcccaccagaatacgaaccatta
ccaaataacgtgtctttcttttacaatgggaaccctgtaaaactgactttgcctgctgag
gaagtagccacgttttacgccaagatgctggaccatgagtacacaaccaagagttccttc
caggagaacttcttcaccgactggagagaggaaatgtcagtagaggagagggaacagatc
aagaagttgtcgaagtgtgatttcacacacatcaacaagtacttcctggataagtctgag
gagaagaaggctatgactaaagaacagaaacaggtcctgaaagaggagaacaacaagctg
actgaggagtatggcttctgtgagctggacggtcaccgggagaagatcgggaacttccgt
gtggagcctccggggctgttccgtggccggggagaacaccccaagatgggcaagctgaag
aagaggatccagccagaggaaatcaccatcaactgcagcaaaggctccaatattccggtg
gccccaaagggccacaggtggaggaaggtgcagcatgacaacacagtgacctggctagcc
tcctgggtggagaacgtccagggaaacttcaagtacgtcatgctcaaccccagctccaaa
ctcaagggggagaaggactggcagaagtacgaggtggctcgtaaactcaagcttaaggtg
gagaccatcaggaggctgtaccgtgaggactggaagaaccgagagatgaagaccagacag
agaggagtggctctctacttcatcgacaagctggccctgcgagcggggaatgagaaggag
gagagtgagacagcggacacggtgggctgctgctctctgagagtggaacacatcaccctg
caccaggagaaggggggccaggagttcatggtggagtttgacttcctgggcaaagactct
attcgctattataatgaggtgcctgtggaaggcagggttttcaagaacctgaagctgttc
atggaaaacaaggagcctgaggatgacctgtttgatagaataaatactacctacttgaac
aagcacttgaaccagtccatgccggggctgacagccaaagtgttccgaaccttcaacgcc
tccaccactctgcaagaacagctcaacaagctcaccactgctgatatgagtctggaggag
aagctgctgtcctataaccgagccaacagagctgtggccattctctgtaaccaccagagg
gcagcacccaagacatttgagaaatccatgcaaaacttgcaggacaaggttgcgcagaag
cagcaacagttagatgtggccaggaaggagctgaaagatgccaaaaaagagcacaagagg
ggtggaactgagaggaccaggaagcttgttgagaagaaagaggctgtggtgaagaggctg
gaggaacagctgaagaaactccagctgcagatgactgacagggaggaaaacaaggtcatc
gctctgggcacatccaaactcaactacctggaccccaggatatcagtggcctggtgtagg
aaattcaatgtgccaatcgagaagatttacaacaaaacccaaagagacaagtttgcttgg
gctattgatatgactgaagaagattttcagttttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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