KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112215590
Entry
112215590         CDS       T05605                                 
Name
(RefSeq) integrin beta-1
  KO
K05719  integrin beta 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03271  Virion - Rotavirus
otw04145  Phagosome
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04514  Cell adhesion molecules
otw04530  Tight junction
otw04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    112215590
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112215590
   04514 Cell adhesion molecules
    112215590
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112215590
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112215590
   04530 Tight junction
    112215590
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    112215590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112215590
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112215590
   04515 Cell adhesion molecules [BR:otw04515]
    112215590
   04090 CD molecules [BR:otw04090]
    112215590
Membrane trafficking [BR:otw04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    112215590
Exosome [BR:otw04147]
 Exosomal proteins
  Proteins found in most exosomes
   112215590
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin beta subunits
   112215590
CD molecules [BR:otw04090]
 Proteins
  112215590
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 112215590
NCBI-ProteinID: XP_042155032
Position
LG16:31953857..32006937
AA seq 797 aa
MDLKLLLISTLLGVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCMDPGFLKQGEAT
STRCDELESLRKRGCSSTKVENPRGSQRALKNKAVTNRNKGEGKLRPEDITQVQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTHLMLEMSKITTDFK
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLVGQQHI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYKELKNLIPKSAVGILS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSRCKNGVTGEGEMGRKCSNISIG
DEVSFTIRITAKQCPKMGKPETIKIKPLGFNEEVEITLNFICECDCHKDGIENSDICHNG
NGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKSCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGMFCECDNFNCDRSNNKLCGGHGHCECRVCICDANWTGSACDCSLDTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPSCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNKTEKEVHVVETL
DCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENP
IYKSAVTTVVNPKYEGK
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggacctgaaactacttctgatttcaacgttgttaggagtcatttgttacagcagtgct
cagcaagaagggaacgagtgcatcaaggctaatgccaaatcctgtggggagtgtattcaa
gtgggagcgaaatgtggctggtgcatggacccagggttcctgaagcagggtgaggccaca
tcgacccgctgtgacgagctggagtccctgaggaagagaggttgtagctccaccaaggta
gagaacccccgaggcagccaacgggccctgaagaacaaggctgtgaccaaccgcaacaag
ggagaaggaaaactccgaccagaggacatcacacaggtccagccacagaaactcaccctc
agcctcagatctggtgaaccccagtcttttaacctgaagttcaaacgggccgaggattac
cccattgacctctactacctgatggacctgtcctactccatgaaggacgatctggaaaac
gtcaagaacctgggaacacatctgatgctggagatgtcaaagatcacgactgattttaaa
atcggttttggttcctttgtagaaaagacagtgatgccttacattagcaccacgccagcc
aagctgctgaacccctgtactggggaccagaactgcacaagtcccttcagctacaagaac
gtcctgaagctgaccagcaatggacaggagttcaataccctggtgggacaacagcatatc
tctggaaacctggactcaccagagggaggcttcgatgccatcatgcaagtggctgtgtgt
ggtgagcacattggctggaggaacgtcacccgtctgctggtgttctccactgacgctggc
ttccactttgctggagatgggaaactgggagggatagttttgcccaacgatgggaaatgt
cacctggagaacaacatgtacacaatgagccactactatgactacccctccatcgctcac
ctggttcagaaacttagcgacaacaacatccagacgatctttgccatcacagaggagttc
cagcctgtttacaaggagttaaagaatctcattcctaaatctgcagtggggatactctct
gctaactccagcaacgttatcaacctcattattgatgcctacaattctctttcctcagag
gtgattctggagaacagcaagctaccagagggagtgaccataatgtatcagtcacgctgc
aagaacggagtgactggtgagggagagatgggaagaaaatgctccaatatctcaatcggt
gacgaggtgtctttcaccatacgcatcacagctaagcagtgtcctaaaatgggcaaacca
gagaccatcaagatcaaacccctagggttcaatgaggaggtggagatcactctgaacttc
atctgcgagtgtgactgtcacaaagatggcattgagaacagtgacatctgccacaacggc
aacgggacatatgaatgtggagcctgcaggtgcaatgagggccgtattggtagacagtgt
gagtgcagcaccaacgaggtgaccagcgaagacctggataagagctgccgtaaagacaac
ggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgcaagaag
agagagaacccagaggagcgctacagcgggatgttctgcgagtgtgacaacttcaactgt
gaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgcagggtgtgtata
tgtgatgccaactggacaggcagtgcctgtgactgttctctggacaccacgacctgcctg
gcttcaaacaagcagatctgtaacggacgaggcacctgtgagtgtggcacctgcaagtgt
actgacccaaagttccaaggccccagctgtgagatctgtcctacctgtccaggggtctgc
acagaacacaaggagtgtgttcagtgcagggcctttgggacgggggagaagaaggacacg
tgtgagagagactgtagctacttcaacctgatcaaggtgaaggacagggacaagctgcct
cagccaggacaggccttccccctgatgcactgtaaggagagggatgccaacgactgctgg
ttctactacacctacgctgtcaacaagacagagaaggaggtccatgtggtggaaacacta
gactgccctgcgggccctgacatcatccccatcgtggctggcgtggtggcgggcatcgtc
ctgatcggcctggctttgcttctcatctggaagctgctcatgatcatccacgacaggaga
gagttcgccaagtttgagaaggagaagatgaatgctaaatgggacacgggcgaaaaccct
atctacaagagtgctgttacgacagtggtcaaccccaaatatgaaggcaaatga

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