KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112215999
Entry
112215999         CDS       T05605                                 
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112215999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112215999
Membrane trafficking [BR:otw04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    112215999
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS DCB Sec7-like_HDS
Other DBs
NCBI-GeneID: 112215999
NCBI-ProteinID: XP_024231314
Position
LG16:complement(58081503..58117556)
AA seq 1848 aa
MQQQQRLAQQQHQKQTESTKTKSMFLSRALEKILSDKEVKRSQHSQLRKACQVALDEIKI
ELEKQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAP
DSSAPGKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTVLLTVRT
CYNIYLASRNLINQTTAKATLTQMLNVIFTRMETQAALESHEQEKDRLCLPHQNPSTSPG
RICGSPRSDRTQDLSGTPSPAASTPDLHTTPLAPDTPSINGQPEECKTEEDVAVTEEKRE
ETPPPVFEDPVSETPITVKQPVEEGHEVGQGEKSEVGGDEKPEVDSKPTEQPTSEEVAPA
PEPESQPQTAPEGDHLPEQTEVVPPRPRTDTNQMNGIMDDRGSVSSTDILDAESMQGGQN
TARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLSVLQGAGPVF
RTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQIEVFFREIF
LTILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERLVNDLSKIAM
GRSGQELGMTPLQELSLRKKGLECLVSILKCMVEWSRDMYVNPNLQANLGQERPSDGEGP
ELKLPDHLASRRDSVSSLDSTMSSSVQSSQPDHPEQYEVIKQQKDVIEHGIELFNKKPKR
GVQFLQDQGMLGNTAEDIAQFLHQEERLDTTQVGEYLGENVRFNKEVMYSYVDQLDFCGR
DFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAYSIIMLT
TDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIAMKDRKEHTITPK
TSKHSVATEKQRRLLYNVEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVRPMFKLAWTP
LLAAFSVGLQDCDDQEVASLCLEGIRCAIRITCIFSMLLERDAYVQALARFTLLTASSSI
TEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILRCISQLELAQLIGTGVKTRYISGVVRD
SQAGIKGFPIGGEEFMPLGLGTLVGGPDRRQMAHIQESVGETSSQSVVVAVDRIFTGSTR
LDGNAVVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGDH
FNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIVKKNRSPTIRD
MVIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHDENIVELAFQTTGHIVMITFQQHFA
AAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVAERPQALREYTSDDMNVAPG
DRVWVRGWFPILFELSCIINRCKLDIRTRGLTVMFEIMKSYGHTFEKHWWHDLFRIVFRI
FDNMKLPEQQTEKHEWMTTTCNHALYAICDVFTQFYEPLSEVLLADIFTQLQWCVRQDNE
QLARSGTNCLENLVILNGEKFSPEVWNVTCSCMLDIFQTTSPHALLTWRPAGQEEEAGDG
KHMDVDFDTQSQSSYDRALSERGGQSQMSTASDETWKGKPHARVSDQKLFAGLLIKCVVQ
LELIQTIDNIVFYPATSKKEDAENMAAAQRDTLEEAAEEGDPGQVEQGMYRHLSSQHLFK
LLDCLLESHTFARDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILFRMYCDR
QLQDSWPDIQTRLLLVCSEALAYFISLTSESHREAWTSLLLLLLTRTLRLTDIKFKPHAS
CYYPHLCEMMQFDLIPELRAVLRRFFLRIGSVFHIAAPEMGQPQPPAP
NT seq 5547 nt   +upstreamnt  +downstreamnt
atgcaacagcaacaacgtcttgctcaacaacaacaccagaagcagacggaaagcacaaaa
accaagagcatgtttctgtctagggcgctggaaaaaatcctgtcggataaggaggtgaag
cggagccagcacagccagctgcgtaaagcatgccaagtggctcttgatgaaattaaaatc
gagcttgagaagcaaaaagatggcacagtggtcccgccccgagcaaactacattgaggct
gacaaatatgtgcttccttttgagcttgcctgtcaatctaagtccccacgcattgtcagc
acctcgttggactgcttacagaagctcattgcatatggccacatcacaggcaacgcccct
gacagtagtgctccagggaagaggctcatcgaccggctggtggagaccatctgtaactgt
ttccagggcccacagacagacgagggggtgcagctgcaaatcattaaggctctcctaact
gcagtgacctcccctcacattgagatacacgaggggactgttctactgactgtgcgtacc
tgttacaacatctacctggccagccgcaacctcatcaaccagaccaccgccaaggccacg
ctcacacagatgctcaatgtgatcttcacccgcatggagacacaggcggctctggagtct
cacgagcaggagaaggatagactgtgtttgccccatcagaacccttccacttcccctggg
cggatatgcggttctccccggtcagaccgcacccaagacttaagcgggacgccatctcct
gcggccagcaccccagacctccataccacgcccctggccccagacacaccctccatcaat
ggccaaccagaggagtgcaagactgaggaggatgtggctgttacagaggagaaaagggag
gagacaccacctccagtttttgaagatccagtttcagagaccccaataaccgtaaaacag
ccagtcgaggaagggcatgaggtggggcagggggagaaatcagaagtaggaggggatgag
aaaccagaagtcgattcaaagccaacagagcaaccaacgagtgaggaagtggctccagca
cctgaaccagagtcacagccccagaccgcaccagaaggggatcatctccctgagcagaca
gaggtggtgccccctagacccaggacagatacgaaccaaatgaatggcattatggatgac
cgtggttcagtgtcttctacagacatcctggatgcagagtctatgcagggtggccagaac
actgctcgtttctcccacatcctgcagaaagacgccttcttggtcttccgctccctctgc
aagctctccatgaagcccctggccgacggaccccctgacccaaagtctcatgagctgcgc
tccaaagtggtgtctctgcagctgctgctgtctgtgctccagggggcagggcccgtcttc
cgtacccacgagatgtttgtcaatgccatcaagcagtacctgtgtgtggccctctccaaa
aacggagtgtcctctgtgcccgaggtgtttgagctctccctcgccatcttcctcaccctt
ctctcccactttaaagtccacctcaagatgcagatcgaggtgtttttcagggagattttc
ctgaccattctggaaacatcgtccagctcctttgaacacaagtggatggtcattcagacc
ctcacacggatatgtgcagatgctcagtgtgtggtggatatctacgtaaactacgactgt
gacctgaacgctgcaaacatctttgagcggctggtgaacgatctatctaagattgccatg
gggaggagtggccaggagctggggatgacccctctacaggagctgagtctgcgtaagaag
ggtctggagtgtttagtgtccattctgaaatgcatggtggagtggagcagagacatgtat
gtcaaccccaacctgcaggccaacctcggccaggagcggccgtcagatggtgagggtccg
gagctgaagcttcctgaccacctggcgtctcgtagagacagcgtcagttctctggactcc
accatgtcatctagtgtccagtcctcccagcctgaccacccagaacagtatgaggtcatc
aaacaacagaaggacgtcattgagcacggcattgagcttttcaacaaaaagcccaagcga
ggtgtccagttcttacaagaccaaggcatgctgggaaacacagcagaggacattgcccag
tttctacaccaagaggagcgcctggacacaacccaggtgggggagtacctgggggagaac
gtgcgtttcaacaaggaggtgatgtacagctacgtggaccagctggacttctgtggccgg
gactttgtgtctgctctgagggctttcctggagggcttccggctccccggagaggcccag
aaaattgacaggctcatggagaagttcgctgcccgatatctggagtgtaaccagggacag
actgagtttgccagtgcagacacggcctacgtcttggcctactccatcatcatgctcacc
accgacctgcacagtccacaggtgaagaacaaaatgaccaaggagcagtacatcaaaatg
aaccgtggtatcaacgacagtaaggacctgcctgaggagtacctgtcctccatatacgat
gagatcgctggcaagaagatcgccatgaaggacaggaaggagcacacgatcacacccaag
actagcaagcacagtgtagccactgagaagcagcgtcgtctgctgtataacgtggagatg
gaacagatggccaagacagccaaggccctgatggaggctgtgagccacgcccaggctccc
ttcttcagcgccacccacctggaacacgtccggcccatgtttaagttggcgtggacccct
ctcctggcagccttcagcgtggggctgcaggactgtgatgaccaggaggtggcctctctg
tgtctggaggggatccgctgtgctatcaggatcacctgtatcttcagtatgctgttggag
agggatgcgtatgtccaagccttggctcggttcaccctgctcacagccagctccagcatc
actgagatgaagcagaagaacatcgacaccatcaagacccttatcactgtggcccacaca
gacggaaactacctgggcaactcttggcacgagatcctgcggtgtatcagccagctggag
ttggcccagctgattggcacaggggtgaagacacgctacatctctggagtggtccgggac
agtcaggctggcatcaagggtttcccaatcgggggagaggagttcatgcccctgggactg
gggaccctggtgggaggtccagacaggaggcagatggctcatatccaggagtctgtggga
gagaccagctctcagagcgtggtggttgctgtagacaggatcttcactggttccacaagg
ctggatggaaatgcagttgtggactttgtgcggtggttgtgtgctgtctccatggatgaa
ctggcctctgctcaccagccgaggatgttcagtctgcagaagatagtagagatctcctac
tacaacatgaaccgcatccgcctgcagtggtcacgcatctggcaggtcatcggagaccac
ttcaacaaggtgggctgcaaccccaacgaggacgtggccatctttgcagtggactctctg
aggcagctgtccatgaagttcctggagaaaggagagctggctaacttccgcttccagaag
gacttcctccggccatttgaacacatcgtgaagaagaacagatctcccactatcagggac
atggtgatccgctgtgtggcccagatggtcaactcccaggcagctaacatccgctccggc
tggaagaacatcttctctgtgttccaccaggccgcctcggatcacgacgagaacattgtg
gagctggccttccagactactggccacatagtcatgatcacgtttcagcagcactttgca
gcagccatagactccttccaggatgcagtgaagtgtctgtctgagtttgtgtgcaacgct
gccttccctgacaccagtatggaggccatccggctcatacgccactgtgctaaatatgtg
gctgaacggccgcaggctctgcgggagtacaccagtgatgacatgaacgtggccccaggg
gaccgggtgtgggtgagaggctggttccccatcctctttgagctgtcctgcatcatcaac
cgctgcaagctggacatcaggacgaggggtctgactgtgatgtttgagattatgaagagc
tatggacacacctttgaaaagcactggtggcacgaccttttccgcatcgtcttccgcatc
tttgacaatatgaagctccctgagcaacagacggagaagcacgagtggatgaccacgacc
tgtaaccacgccctgtacgccatctgtgatgtcttcacccagttctatgagcctctcagt
gaggtcctgctggctgacatcttcactcagctgcagtggtgtgtcagacaagataatgag
cagttggcccggtcagggactaactgcctagagaacctggtcatcctgaatggggagaag
tttagcccagaggtgtggaacgtcacctgctcatgtatgctggacatcttccagaccacc
agcccacacgccctgttgacatggcgaccagctggtcaggaagaggaggctggtgatggg
aaacatatggatgtagattttgacacccaatcccagagcagctatgacagagccctgtca
gagagaggaggtcagagccaaatgtccactgccagcgatgagacctggaagggtaaaccc
catgccagagtgtcagaccagaagctgtttgctggactgctcatcaagtgtgtggtgcag
ctggagctgatccagaccattgacaacattgtcttctacccggcaaccagcaagaaggaa
gatgccgaaaatatggctgctgcacagagggatactctggaggaggctgcagaggaaggg
gaccctgggcaggtggagcaaggcatgtacagacacctctcctcccagcaccttttcaag
ctgctggactgcctgctggagtcacacaccttcgccagagatttcaactctaacaacgag
cagaggactgcactctggagagcaggatttaaggggaagtcgaagcccaatctgctaaag
caggagaccagtagcctggcctgtagcctgcgtattctgttccgtatgtactgtgaccgg
cagctccaggactcctggcctgacatccagacacgactgctgctcgtgtgcagcgaggcc
ctggcctactttatcagcctaacctctgagagccacagagaggcctggacaagcctgctc
ctcctgctgctcaccaggactcttcgactgaccgacatcaagttcaagcctcatgcctcc
tgttactacccgcacctgtgtgagatgatgcagtttgacctgatcccagagctccgcgcc
gtcctacgccgtttcttcctccgcatcggctccgtcttccacatcgctgctcctgagatg
ggccagccacagcccccggcaccctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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