KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112218271
Entry
112218271         CDS       T05605                                 
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112218271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otw03400]
    112218271
Enzymes [BR:otw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     112218271
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     112218271
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 112218271
NCBI-ProteinID: XP_024234693
Position
LG19:complement(5125797..5136710)
AA seq 348 aa
MAHMVVTHEPMALQEPANIAKAPAKKRGRTAQPKEPKPPKMPKAKPGPKAKPGPKAKPGP
KAKPGPKPKKGKEGQEADGTQEKIDKTFKKVKKKRDRFKGMTEDEVMSRTLTDILDYNLD
YVIIGINPGLVAAYVGRWFPGHGNHFWKCLFLSGFTDEQLNHMSDTSLPEKYKIGFTNMV
ARTTPGSKDLSTKELREGALILVEKLKKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFG
LQPHKIPDCEVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLRGVARSEEIQELEY
SFDLGLAKEDAKRMAIKEEAYDPGYEAAFGGAYGEGGPGPEEGQSNGH
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggctcatatggttgtcactcatgagcccatggcactgcaagagcccgccaacatagcg
aaagctccagcaaaaaagcgagggagaacggcacaaccaaaggaacccaagccacccaaa
atgcccaaggccaaaccgggacccaaggccaaaccgggacccaaggccaaaccgggaccc
aaggccaaaccgggacccaagcccaagaaaggcaaggagggtcaagaggcagacggcacg
caggagaaaatagacaagaccttcaagaaagtcaagaagaaaagggaccgcttcaaaggc
atgactgaggatgaggtcatgagtagaactctgaccgacatccttgactacaacctggac
tatgttatcattggaatcaacccaggtctcgtggcagcctatgttggacgatggttccct
ggccatggaaaccatttctggaagtgcctgttcttgtccggattcactgatgagcagctt
aaccacatgagcgacaccagcctgccggagaaatataagatcgggttcaccaacatggtg
gcaaggacaacgcctggaagcaaggacctgtcaaccaaagagctacgcgagggcgcctta
attcttgttgagaagctgaaaaagtacaagcccctcatagctgttttcaatggaaaatgt
atctatgaaatgttctgcagagagatgtttggtaaaaagcccaagaagcttgactttggt
ctgcagccacacaagataccggactgtgaagtggcattgtatctgatgccctcgtcgagt
gcccgctgcgcccagtttccccgtgctcaggacaaagtgcacttctacatcaagctgagg
gaattgagggaccagctcaggggcgtggcccgatctgaggagattcaggagttggagtac
agctttgacctgggactggccaaagaggacgctaagaggatggcgatcaaggaagaggcg
tacgacccaggctacgaggccgccttcggcggagcatatggagagggcgggcccgggcct
gaggagggccagagcaacggtcactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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