KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112218613
Entry
112218613         CDS       T05605                                 
Name
(RefSeq) semaphorin-3ab
  KO
K06840  semaphorin 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
SSDB
Motif
Pfam: Sema ig PSI Ig_6 Ig_3 V-set Ig_2 I-set
Other DBs
NCBI-GeneID: 112218613
NCBI-ProteinID: XP_024235320
Position
LG19:30376150..30431883
AA seq 799 aa
MASFWGMVVLLCGMMVISGAQKTKSNMPRLKLSYKEMLESNNLVTFEGLANSSAYHTFLL
DEEKGRLVVGAKDHIFSFNLLNISRDLAQIPWPASTSRRDECKWAGKDLMRECANFIKVL
QPFNQTHLYVCGTGAFHPVCAYLEVGKKLEDSVFRLEPLIENGRGKSPYDPKLLTASMLI
DGELYSGTSADFMGRDFAIFRTLGQHHPIRTEQHDSRWLNDPRFVSVHLIPESDNPEDDK
IYLFFRENAMDGEHAGKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID
THFDELQDVFLMSAKDPKNPTIYAVFTTSSNIFKGSAVCLYSMADIRRVFLGPYAHRDGP
NYQWVPFPGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARGHPAMFNPIYPINNRPII
VKTDTDYQFTQIVVDKVEAEDGQYDVMFIGTDMGKVLKVVSIPRGSWHDLEEVLLEEMTV
FREPTAITAMELSTKQQQLYLGSDLGISQMPLHRCEVYGKACAECCLARDPYCAWDGTEC
SRYFPMAKRRTRRQDIRNGDPLTQCSDLQHHDNLNVQPTVLDKTVYAVENSSTFLECSPK
SQRALTYWQYQQVNDDRRQDIKAEDRFVRTEQGLLIRILNKKDSGTYVCQTVEHGFMQTL
LRVTLEVIDTERLDELIHRDDETATHTAATHTTSWDMPPARESSNQKLWYRDFLSLVNHP
TLNSVDEFCEQVWKREKKQRRQKAHLSQQVQLHQQQQGLVHAHTHVNAHGLAAKWKHLQE
RQKGRNRRTHELERAPRSV
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggcctctttctggggcatggtggtgttgctgtgtgggatgatggttatttctggagca
cagaagacgaagagcaatatgcccaggctaaagctctcttataaagagatgttggagtcc
aataacttggtgacatttgagggcctggccaatagctcagcttaccacacgttcctattg
gatgaggagaagggtcgtctggtggtgggagccaaggaccacatattctccttcaacctg
ctcaacatcagcagagacctggcacagatcccgtggcctgcatccacctccagaagagat
gagtgtaaatgggcagggaaggacctcatgagggaatgcgctaacttcatcaaggtgttg
cagccttttaaccagacccatctgtatgtatgtggaaccggagccttccaccctgtctgc
gcctacttggaggtggggaagaaactagaggacagtgtgttcaggctggagcccctgata
gagaacggtcgagggaagagcccttatgaccccaagctgctcacagcgtccatgctcatc
gatggcgagctgtattctgggacgtcagcggacttcatggggcgggattttgccatcttc
cgtacgttgggacagcatcaccccattagaactgagcaacacgactcccgctggctgaat
gatcccaggtttgtgagtgtccatctgatcccagagagtgacaaccccgaggatgacaag
atctacctgttcttcagagagaacgctatggatggggaacacgcagggaaggctacacac
gcacgcatcggacagctctgcaagaatgactttggaggccacaggagtttggtgaataag
tggactactttcctgaaggccagactggtgtgttctgtacctggactcaatggcatagac
acacactttgacgaactacaggatgtgtttctgatgagcgctaaggatcccaagaacccc
accatctatgcagtgttcactacatccagtaacatcttcaagggctcagcagtgtgtttg
tacagcatggcagacatcagaagggtgtttctaggtccctatgcccacagggacggccct
aactatcagtgggttcccttccccggaagggtaccgtacccacgacctggcacgtgcccc
agcaagacattcggaggatttgattcaacaaaggacttgcctgatgatgtcataacattt
gcgagaggacacccagcgatgtttaaccccatctatcccatcaacaacagaccaatcata
gtcaagacggacacggactaccagttcacacagatagtggtggacaaagtggaggctgag
gacggacagtatgacgtcatgttcataggcacagacatgggtaaagtgctgaaggtggtg
tccatccccagagggtcctggcatgacctggaagaggttctactggaggagatgactgtg
ttcagggagccaactgctattacagcgatggaactctccacgaagcagcaacagttgtac
ctaggctcagatctaggcatttcccagatgcctttgcatcgctgtgaggtgtacgggaag
gcgtgtgctgagtgctgtctagctagagacccttactgtgcctgggatgggaccgagtgc
tcacgatactttcccatggccaagaggaggacaaggagacaggacatcaggaatggagac
cctttaacccagtgttcagacctgcagcatcatgataacctgaatgtgcagcccacggtg
ctggataagacagtgtatgcagtggagaacagcagtacgttcctggagtgtagccccaag
tcccagagagcactcacctactggcagtaccaacaagtcaacgacgacaggagacaagac
atcaaagcagaggatcgttttgtccgtacggagcagggcctgctgatccgcatattgaac
aaaaaggattctgggacgtatgtgtgccagactgtagaacacggcttcatgcagacgctc
ctaagggtcaccctggaagtcatcgacactgaacgcctcgacgagctcattcaccgtgat
gacgaaaccgccacacacaccgctgccacacacaccacctcctgggacatgcccccagcc
cgggaatcgtccaatcagaagctatggtaccgtgacttcctgtcattagtgaaccacccg
accctgaacagcgtggatgagttctgtgagcaggtgtggaagagggaaaagaagcagagg
aggcagaaagcacacctatcccaacaggtccagctacaccagcagcagcagggcctcgtg
cacgctcacacccacgtgaacgcccatgggcttgcggccaagtggaaacacctgcaggag
aggcagaagggccgcaaccgtcggacccacgaactggagagagccccccgcagcgtctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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