KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112218700
Entry
112218700         CDS       T05605                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
  KO
K15685  E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112218700
   04131 Membrane trafficking [BR:otw04131]
    112218700
   04121 Ubiquitin system [BR:otw04121]
    112218700
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112218700
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     112218700
Membrane trafficking [BR:otw04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    112218700
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112218700
SSDB
Motif
Pfam: zf_Hakai zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_2
Other DBs
NCBI-GeneID: 112218700
NCBI-ProteinID: XP_024235508
Position
LG19:complement(36792978..36796354)
AA seq 486 aa
MYQNDTDLQGTDGSGILGGPDVRRRIPIKLISKQPVRNKDVNHSQRPLSRLPSKTQSNDE
EGFGFKQEDRFERKSGDVLGNQRRFPQPVFWDYKLNLVGEKDNTPVHFCEICGLPIKLYG
RMIPCKHVFCYDCALLHEKKMEKMCPGLTLYSCTDPVQRIEQCLRGLLYMCSIVPGCKRT
YLSQRDLQAHVNHRHMRASKAAGGGILPRLEPLHPQLASEPPDHFRRLPLPHLAKGHPLI
PPQQQGHDPYGQPPPASPSTPSSELGPSGLHRPPLGQETFRIATLTTRKHSNLITVPIQD
DSGDSPLPQSAQGMPPPHQHQGDYPGQPHHLMALPPQQQHYGPPPQPPPTLSHPMQHLPQ
GSGTPHLVYNQVPPMSSGLPPITPPPGHIMGQMPPYMNHPPPPGPLPQHGGPPVNTPHPH
HYNPSSMQQDRGTLSPPFNQPGGLSPGMWPAPRGTHPPRMQGPPPHGQMPGPPQHPDQSR
YHPYYQ
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtaccaaaatgacactgatctacaaggcactgatggttcaggcattcttgggggccct
gatgtacgcagacggatccccattaaactgatatccaagcagccagtcagaaacaaggat
gttaaccactcacagagacccttaagcagactgccctccaaaacccagtctaatgatgaa
gagggctttgggttcaagcaggaagatagatttgagcgcaagtctggagatgtgttaggc
aaccagaggaggttccctcagcccgtgttctgggactacaaactgaatctggttggcgaa
aaggacaacacgccagttcatttctgtgagatatgtggccttcccataaagctctatgga
cgcatgattccctgcaagcatgtattttgctatgattgtgccctgctccatgagaagaag
atggaaaagatgtgtcctggtctcaccctatacagctgcacagatccggtccagcggatc
gagcagtgcctgcggggcctcctctacatgtgcagcatcgttccgggctgcaagcgcacc
tacttgtcccagcgcgacctgcaggcccatgtcaaccaccgacacatgagggcatccaag
gctgcaggagggggcattctaccacgccttgagcccttgcatccacaactggcctcagag
ccacctgaccacttccgtcgactaccactgccccacctggccaaaggacaccccctcata
cccccacagcagcagggacacgacccctatggtcagccccctcccgcctctccgtcaacc
ccctcttctgaactgggcccctctggtctccatcgccccccactgggtcaggagacgttc
cgcattgccacgttgactactcgcaagcacagcaacctcatcactgtgcccattcaggat
gactctggggactcgccccttccccagtctgcccagggtatgccccctccccaccagcat
cagggagactaccctggccagccccaccacctgatggccctcccaccccagcagcagcac
tacggcccaccccctcagccgccacccaccctcagccaccctatgcagcacctgcctcag
ggctccgggacgcctcatctggtctacaaccaggtccctcccatgtcctcaggcctgcct
cctatcaccccaccacccggacacatcatgggccagatgcctccctacatgaaccaccca
cctcccccaggccccctgccccaacacggtggtcctcctgttaacacgccccatccccac
cactacaatccaagctccatgcagcaggatcggggcactcttagcccgccctttaatcag
cccgggggactgagcccagggatgtggccagcccccaggggcactcacccgccccgcatg
caggggcccccaccccatggccagatgcctggtcctccccagcacccagaccagtcccgc
taccacccttactatcagtaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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