KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112218821
Entry
112218821         CDS       T05605                                 
Symbol
nfatc3b
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
  KO
K17333  nuclear factor of activated T-cells, cytoplasmic 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04020  Calcium signaling pathway
otw04148  Efferocytosis
otw04218  Cellular senescence
otw04310  Wnt signaling pathway
otw04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112218821 (nfatc3b)
   04310 Wnt signaling pathway
    112218821 (nfatc3b)
   04020 Calcium signaling pathway
    112218821 (nfatc3b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    112218821 (nfatc3b)
  09143 Cell growth and death
   04218 Cellular senescence
    112218821 (nfatc3b)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    112218821 (nfatc3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112218821 (nfatc3b)
Transcription factors [BR:otw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) NF-AT
    112218821 (nfatc3b)
SSDB
Motif
Pfam: RHD_dimer RHD_DNA_bind TIG
Other DBs
NCBI-GeneID: 112218821
NCBI-ProteinID: XP_024235782
Position
LG19:complement(44562687..44590265)
AA seq 1059 aa
MSTVNFSGNEELDFRLIFGEEAQQQLGPVAGPDPDDSTQYYTTQPIGQAQDVQQSHQRHP
AVSNQAPLQAHGNYHPSSSYEDHGSRYSATGHIPKAFDCPSIQITSISHQELVSSQDAVL
ISGADGGGECSHERSSSTDHLYLSLDPCYRDSSSLNPSPCSSLSSRSWLSDMSSCESFSH
VYDDVEAELNEAAARFTLGSPLASPLASPVCSPQGQAAGGFGVELWQQQYFMSTYSLSPR
QSPRGSPHQSPRQSPRQSPCHSPRNSVTDENWLNLRPTSRSSSRPTSPCGKRRHSSADVH
LASPSPSPHHSPSPTPGHSPRGSVTEDTWVVGSPGAMGALLYSFPEVDVPSKTRRTSHHM
GLLQAQGDSGQRLEDHRAALPNLDSPAEESGSNLKQDGLFEELFLSVPSHFTWSKPKLGN
TPLFRTSSLPPLDWPLPSQFGQCELKVDVQPRGHHRAHYETEGSRGAIKAASGGHPLVKL
IGYSEKPVNLQIFIGTADDRYLRPHAFYQVHRVTGKTVATACQESVISSTKVLEIPLLPE
NNMSSSIDCAGILKLRNSDIELRKGETDIGRKNTRVRVAFRVYIPQPSGKVMCLQAASIP
VECSQRSATDLPQMESCSPVSCLVSGGEEMVITGSNISPESKVIFLEKSPDGHTQWEVDG
KVIGEKSKISRIVVEIPTYHNTTVSSAVQVQFYVCNGKRRRSQTQNFTYLAGASPHHYPT
AIDCAVVATRLKQEHGDSAYLSTCTNPPGLYPTSSLLTSPDGAFSQDKPLYGSSGGHPVP
CDPPSQAAYTPSGSSPLQHSPHLHSYSPRMGYQQISLVHTPDPMPPIRTRPVYQVTQHNV
PYSGQASSPMRPGPAAPQVNRPQSAQTRPAASSPHREMYQSLIGPDLSGTTLQSAGNHTQ
NTTQLHSLSYHCSQSDSDLAALQAEYNLSYHSARNLPASYSPTPGAQATCSTSPSASASS
GGPLRQLSPSRAQGLASSSDPQECPPAPHFHFSNDQGKVNIKQEPEEKLPLGNMGLQEIT
LDDVNEIIDRDISQLIGGSAAESSQPGQDPYEWDSVILQ
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgagtactgtaaattttagcggcaatgaggagctggacttcagacttattttcggggag
gaggcgcaacaacagctaggccccgtagctggtccagaccctgatgacagcacgcaatac
tacaccacccagcctattggccaggcccaggacgtacaacagagtcaccagcgccatcca
gctgtctctaaccaggcgcctctgcaggcccatggtaactaccaccctagctccagctat
gaagatcacggttccagatacagtgccactggacacatccccaaggcatttgactgccca
agcatccaaatcacatccattagtcaccaagagctggtctccagccaggatgccgtgctc
atcagcggggcagatggcgggggggagtgcagccacgagcgttcctcgtccacggaccac
ctctacctgtccctggacccctgttacagggactcatcctccctgaaccccagcccctgc
agcagcctgtcctccaggagctggctgtctgacatgtcttcctgcgagtccttctcccat
gtgtatgacgatgtggaggctgagctaaacgaggcggccgcccgcttcaccctgggctcc
ccgctggcctctcccctggcctcccctgtctgctcgccacagggccaggccgcaggggga
tttggggtagagctgtggcagcagcagtacttcatgagcacctactcactctcgccccga
cagtcccctcgcgggtccccccaccagtcccctcgccaatcgccccgccagtcgccctgt
cactccccgcgcaacagcgtcacagatgagaactggctgaacctgcgtcccacctccagg
tctagctcaagacccacatccccttgtgggaaaagaaggcactccagtgccgacgtccac
ttagcctccccctccccctcgccacaccactcccccagccccacaccgggccactctccc
aggggcagtgtgacagaggatacctgggtggttggaagccctggtgccatgggggccctc
ctgtacagcttccctgaggtagacgttccgtccaagaccaggaggacctctcatcacatg
ggtctattgcaagcacagggagattccgggcagaggctggaagaccacagagcggctttg
cctaacctggattcacctgcagaggagtctgggtctaatctaaaacaggatggtcttttt
gaagaactttttctctcggttccctcacacttcacctggagcaaacccaaacttggcaac
acaccccttttcagaacctcgtccctgccccctctggactggcccctgcccagccagttt
ggccagtgtgagctgaaggtggatgtgcagccgcggggccaccacagggcccactatgag
acagagggcagtcggggggccatcaaggctgcctcaggtggacaccctttagtcaagctc
attggatacagcgagaagccagtcaacctgcagattttcattggaacggcagacgatcgc
tacttgagaccgcatgccttctaccaggtgcacagagtaacagggaaaacggtggctact
gcttgccaggaaagtgtaataagcagtacaaaggttctggaaatacctctgctccccgaa
aacaatatgtccagcagtattgactgtgcaggcatcttgaagctgaggaactctgacatt
gagctcaggaagggggagacagacatcgggaggaagaacacgcgtgtgcgagtggcattc
cgtgtgtatatccctcagcccagtggaaaggtcatgtgtctgcaagctgcctctattcct
gtggagtgctcccagcgctcggccacagaccttccccagatggagagctgcagtcccgtc
agctgcttggtcagtgggggggaggagatggtcatcaccggctccaacatatccccagag
tcaaaggtcatcttcctggagaaaagccctgatggacacacacaatgggaagttgatgga
aaagttattggtgaaaagagtaaaatatccagaatcgtggttgagattcctacctaccac
aacacaactgtgagctctgcagtccaggtgcagttctatgtgtgtaacgggaagaggaga
agaagccagacacaaaacttcacatacttggctggtgcttctccacaccattatcccact
gccattgactgtgcagttgtggctactcggctgaagcaagagcacggagactcagcctat
ctgtctacctgcaccaatccccctggcctatatccaaccagcagcctgctgacttctcct
gacggggccttctctcaggacaagcccttgtatggttcctctggtggtcacccagtgcct
tgtgatccaccctcccaggcagcatacactccctctggctcctcgcctcttcagcactcc
cctcacctccacagctacagcccccgtatgggataccagcagataagccttgtgcataca
cctgaccccatgccacccattcggacaaggcctgtctatcaggtcacacaacacaatgtg
ccttacagtggccaggccagctctcccatgagacctggccctgccgcaccccaggtcaat
cgacctcagtctgcccagaccagaccagctgcctccagccctcacagggaaatgtaccag
agcctcattggacctgatctctctggcaccactctccagtctgcgggaaaccacacccag
aatacaacacagctgcactctctaagctaccactgctcccaatcagactctgatctggca
gccctacaggctgagtataatctgagctatcactctgcaagaaacttgcctgcctcgtat
tcccccacccctggagcacaagcaacctgctccacctccccgtcagcatcagcctcctct
gggggtcctctgaggcaactgtcccccagcagagcccagggcctggcctctagtagtgac
ccccaggagtgtcccccggccccccatttccatttctcaaatgaccaagggaaagtgaac
atcaagcaggaaccagaggagaagctgcctctcggcaacatggggctccaggagatcaca
ctggatgatgtgaatgagatcatcgacagagacatatctcagctcattggtggtagtgca
gcagagtccagccaaccaggacaggatccttatgaatgggattctgtgattctccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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