KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112219888
Entry
112219888         CDS       T05605                                 
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
  KO
K12613  mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112219888 (dcp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112219888 (dcp2)
Enzymes [BR:otw01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.62  5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
     112219888 (dcp2)
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112219888 (dcp2)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     112219888 (dcp2)
SSDB
Motif
Pfam: DCP2 NUDIX NUDIX_4
Other DBs
NCBI-GeneID: 112219888
NCBI-ProteinID: XP_042158624
Position
LG20:complement(41807241..41822010)
AA seq 402 aa
METKRGEIPNGVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNAPGLPQC
GIRDFAKAVFNHCPFLLPNGEDVQKVLEQWKEYKMGVPTYGAIILDESLDNALLVQGYLA
KSGWGFPKGKVNEDEAPHVCAVREVMEETGFDIKDRICKDTYIEQKITDQLARLYIIPGV
PKETKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFVRPLREWIA
KRKGESTDSDEDFASNGSTPCKPLDKARSKHRRAQMLPEASPAEGWGKQKQPKPLGQLSQ
YEVSELLKAKNLNVKGNGKKHQDSPNLKKRANGVGNQQKEEKRLQPRRLQDNFDTDAALP
SDTCSSTNGQQVVCNSNCEHLSSRSFLNFKFDREAIMKCFDS
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggagacaaaaagaggggagattcccaacggcgtattggacgacctctgcagtcgattc
atcctccacatccctagtgaagagagagacaatgctatccgcgtgtgcttccagatcgag
cttgcccattggttctacctggacttctgcatgcagaatgcaccaggattacctcagtgc
gggataagggactttgccaaggctgtttttaatcattgtccattcttgctgcccaatggg
gaggatgtacagaaggttctagaacagtggaaggaatataagatgggtgttccaacctat
ggtgccattattctagatgagtcgcttgacaatgcattgctggttcagggctatttggcc
aagtcagggtggggctttccaaagggaaaagtcaatgaagatgaggctccccatgtttgt
gctgtacgagaggttatggaggagacgggtttcgatatcaaagatcgcatctgcaaagat
acgtacatcgagcagaaaatcactgatcagttggcccgattgtacataatacctggggta
cccaaggagactaagttcaatcccaaaacaaggaaggagataaggaacatcgagtggttc
ccgattgagaaactaccatgtcacagaaacgacatgactcccaagtctaaacttggactc
gcccccaacaagtttttcatggccattccttttgtcagaccactccgagaatggattgcc
aagcgtaaaggagagtctacagacagtgatgaggattttgcatccaatggcagcactcca
tgcaaacctctggacaaagcacgctccaagcatcgacgggcccagatgttgcctgaggca
tctccagcagaggggtgggggaagcagaagcaacccaagcctctgggacagctgagccaa
tacgaggtctctgaactcttgaaagccaagaacctcaatgtgaaaggcaatgggaagaag
caccaggattctcccaacctgaagaaaagggccaatggagtcggcaaccagcagaaagag
gagaagagacttcagcccaggagactacaggacaactttgacacagatgcagcactgcca
tctgacacgtgcagctccaccaatgggcagcaggtggtctgcaacagcaactgtgaacac
ctctcctccaggtccttcctcaacttcaagttcgacagggaggccatcatgaaatgcttt
gactcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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