KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112221036
Entry
112221036         CDS       T05605                                 
Name
(RefSeq) RNA-binding protein 5-B isoform X1
  KO
K13094  RNA-binding protein 5/10
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112221036
Spliceosome [BR:otw03041]
 Complex A
  Other components
   Complex A specific factors
    112221036
SSDB
Motif
Pfam: G-patch OCRE RRM_1 zf-RanBP G-patch_2 RED_N GSIII_N zf-C2H2_4 YL1_C
Other DBs
NCBI-GeneID: 112221036
NCBI-ProteinID: XP_024238871
Position
LG02:15267819..15280158
AA seq 832 aa
MGRLSRTERSGRYGGNDLGRGESEWRERGEQDMRRWGEERHSERYDGGERRGSRGSPEQR
DRKRRNSDRSEDCYHSDGDYPEQEYREEPGEEKESKTIMLRGLSLHITEGDIRAALDQLE
GPQPIDVRLMKKRTGISRGFVFVEFYHLQDATRWMETNQKLLVIQGKSVAMHYSIPRHKF
EDWLCNTCGLYNFRRRLKCFRCGAAKAEGETNTTGVTEIQPSGDYYGDTIILRNIAPLTT
VEAILTALAPYANLSPSNIRLIKDKQTGQNRGFTFVQLSSPLEASQLLTILQGLQPPLKL
DGKTIGVDYAKSARKDLLLPDGNRISAFSVASTAIAAAQWSSSQPQQGAEGHLSEYSYLE
EGYAPYTQDYQAYYQQAAGDPSQGNGILGAAPGVPAATGVVISQGAQVYQSNLISHTATQ
ALQLAQQLEAKQTGIHSAAATTTAPVSTATATLSGLATDTAVPDTSTYQYDESSGFYFDP
QTGLYYDPNTHYYYNSQTQQYLYWDSEKQTYVPASAADQTEQSANASAAASNEAKEAKER
KQEKPKSKTAQQIAKDMERWAKSLNKQKENFKSSFQPVSQEERKEAAAADAGFTLFEKKQ
AGSLEMLMLEAVQRPEEQAPTNSAKVGLVAAYSGDSDPEEGGAAEPDHGGGEQDQLTDWK
KMACLLCRRQFPNKDGLVRHQQLSDLHKQNLEVHRRSKLSEAELEEQERRETEMKYRDRA
AERREKYGIPEPPAPKKKKFTAQPAPVINYEQPTKDGLNSDNIGNKMLQAMGWQEGRGLG
RNQQGITAPIEAQLRAKGAGLGTKGSSYGLSASDTYKDAVRKAMFARFTEME
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgggacggttgagtcgcacagagcgtagcggaagatacggcggcaacgatctgggccgg
ggtgagtcagagtggcgtgagaggggagagcaggacatgcgccgatggggagaagagaga
cacagcgaacgctacgatggaggagaacgccgggggagcagaggcagcccagagcagaga
gacaggaagcgacggaacagcgatagatctgaagactgttaccactctgatggagactac
cctgagcaggaatacagggaggagccaggggaggagaaggagagtaaaaccatcatgctc
cggggcctgtctcttcacattacagagggagacatccgagctgccctggaccagctggag
ggaccccagccaatagatgtccgcctgatgaaaaagaggacgggtataagccgaggtttc
gtcttcgtggagttttatcacttgcaagatgctacccgatggatggagaccaatcagaaa
ctcctggtcatccaaggcaagagtgtggccatgcactacagcatcccgcgacacaagttt
gaagactggctctgcaacacttgcggcctgtacaatttccggaggaggctgaagtgcttc
aggtgtggagcagctaaagctgagggtgagaccaacaccactggcgtcacagagatccag
ccgagtggagactactacggcgacacaatcatcctgaggaacatagcccctttgaccacg
gtggaggccatcctgacagccctggccccctacgccaacctgtcacccagcaacatccgt
ctcattaaggacaaacagacgggccagaacagaggcttcacctttgtacagctctcctcc
cctctggaggcatctcagctcctaaccatcctacaaggactacagcctcctctcaagctg
gatggaaagaccattggtgtggactatgccaagagtgccaggaaggatctcttgctccca
gacggtaaccggatcagtgccttctctgtggccagcacagccatcgctgctgcccagtgg
tcctccagccagcctcagcagggtgctgaaggacatctgtcagagtacagctacctagag
gagggctacgctccctacacacaggactaccaagcctactaccagcaggcagcaggagac
ccttcccaggggaacggaatactgggagcggctccaggtgtcccagcagctacaggagtg
gtgatctcacaaggagcacaggtctaccaatccaacctcatcagtcacactgccacacaa
gcgttgcaattggcccagcaactggaagcaaaacagaccggaatccactcggctgctgcg
accacgacagcgccggtttccacagccacagcgacactctctggactggccactgacaca
gctgtacctgatacctctacctaccagtatgacgaatcctctggcttctacttcgaccct
caaaccggcctctactatgacccaaatacccactactactacaactcccagacgcagcag
tacctctactgggacagtgagaagcagacgtacgtccctgcctcagccgccgaccaaact
gagcagagtgcgaatgcatcagcagcagctagcaacgaggctaaggaagccaaggagagg
aaacaagaaaagcccaagagcaagacggctcagcagatcgctaaggacatggagcgctgg
gcgaagagtctgaacaagcagaaggagaactttaagagcagcttccagcccgtcagccag
gaggaaaggaaagaggccgcggccgctgacgcaggcttcacactcttcgagaagaagcag
gctggaagcttggaaatgctgatgttagaagcagtgcagcgccctgaggagcaggcccca
accaactcagccaaggttggtttggtggcagcctatagtggagacagtgacccagaggaa
gggggtgcagcagagccggaccacggtggtggtgagcaggaccagctgacagactggaag
aagatggcgtgcctgctgtgtaggagacagttccccaataaggacggcctggtgcgccac
cagcagctctcagacctccataagcaaaacctggaggtccaccgcagatctaagctgagt
gaggctgagctggaggagcaggagaggagagagaccgagatgaagtacagggaccgggct
gcggagaggagagaaaaatacggcatccctgaacccccagcacccaagaagaagaaattc
actgcacagccagcaccagtcattaactatgaacaacccaccaaggacggtctgaacagt
gacaacatagggaacaagatgctgcaggccatgggatggcaggagggcagaggtctgggc
cgtaatcagcagggcatcactgcgcctatagaggctcagctgagggcaaagggggctggt
cttggaaccaaaggcagcagctacggcctgtctgcctccgacacatacaaagacgctgtc
cgcaaagccatgtttgcccgcttcactgaaatggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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