KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112221460
Entry
112221460         CDS       T05605                                 
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like
  KO
K08530  peroxisome proliferator-activated receptor gamma
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320  PPAR signaling pathway
otw04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    112221460
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    112221460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112221460
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112221460
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    112221460
Nuclear receptors [BR:otw03310]
 1. Thyroid hormone like
  1C. Peroxisome proliferator-activated receptor (PPAR)
   112221460
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 112221460
NCBI-ProteinID: XP_024239370
Position
LG22:26697853..26707396
AA seq 411 aa
MSPLWSSNCSVVSLSRPTLHSKSPTYTDPSTLLYIDCRVCGDTASGFHYGVHACEGCKGF
FRRTMRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLLVGMSHDAIRFGQMPQEEREKLL
AEFMDVSPRSPESADLRALSRQLCLSYHRHFPLTKSRARAILSGKTHGNSPFVIHDMKSL
TAGQDFINSRQFPFLEHQRSVLPPQEPAGELELFFFRQVQFRTAEAVREIIEFAKSIPGL
TELDINDQVTLLKYGVIEVMLIMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEMMEP
KFEFAVKLNVLELDDSDTALFLAVIILSGDRPGLVNVKPIEDLQEAVLQALELQLKTIHP
DCPQLFARLLQKMTDLQPLVADHIRLIHLLKKQERETCLHPLLQEIMRDLY
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgtcccctctttggtctagcaactgtagcgttgtcagcctgtccagacccactcttcac
tccaagtcccccacttacacagaccccagcactctgctctacattgactgcagagtgtgt
ggggacacggcctcaggcttccactatggagtccatgcctgtgagggctgcaaggggttc
ttccgaagaaccatgaggttaaaactggtgtatgaccactgtgatctgcattgtcggatt
cacaaaaagagccggaataaatgccagtactgtcgctttcagaaatgtctgcttgtgggc
atgtcacacgatgccatccgcttcggccagatgccccaggaggagagagagaagctgctg
gctgagtttatggatgtgtcccccaggagcccagagtcagcggacttgagagccttgtcc
agacagctgtgtctgtcctatcacagacactttcccctgaccaagagcagggccagagcc
atcctgtctgggaagacccacggaaactcaccatttgtcatccatgacatgaagtccctg
acagcgggtcaggactttataaacagtagacagttccctttcctggagcaccagaggtct
gtcctgccccctcaagagcctgccggggagctggagctcttctttttccggcaggttcag
ttccgcaccgccgaagctgtacgagaaatcatagagtttgccaagagtatccctgggttg
acagagctggacataaatgaccaggtgaccctgctgaagtacggggtcatcgaggtcatg
ttgatcatgctggcgccgctgatgaacaaggacggcacactgttcgcctacggacagatc
ttcatgacccgggagttcctcaagagtctgaggaagcccttctgtgagatgatggagcca
aagtttgagtttgcggtaaaattaaacgtgctggagctggacgatagtgatacagcgctc
ttcctcgctgtcatcatcctcagtggagaccgtccaggcctggtgaatgtgaagcccatc
gaggacctccaggaggcagtactgcaggccttggagctgcagttgaagaccatccaccca
gactgcccccagctgtttgccaggctgctgcagaagatgaccgacctgcagccgctggtg
gctgaccacatccggctcatccacctgctcaagaagcaggagcgggagacttgtctgcac
cccctactacaggaaatcatgagggacctgtactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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