KEGG T05605: 112223839

Oncorhynchus tshawytscha (Chinook salmon): 112223839

Entry

112223839         CDS       T05605

Name

(RefSeq) eukaryotic translation initiation factor 3 subunit C-like isoform X4

K03252

translation initiation factor 3 subunit C

Organism

otw Oncorhynchus tshawytscha (Chinook salmon)

Brite

KEGG Orthology (KO) [BR:otw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:otw03012]
    112223839
Translation factors [BR:otw03012]
Eukaryotic type
  Initiation factors
   eIF-3
    112223839

SSDB

Motif

Pfam:

eIF-3c_N PCI DUF2779

Other DBs

NCBI-GeneID:

112223839

NCBI-ProteinID:

XP_024242864

Position

LG24:complement(4003026..4083162)

AA seq 1013 aa
MSRFFATGSDSESEDSSLSDEITPKVPGTTFTKQSLLLRDDEEDTKRVVRSAKDKRFEEL
TNLIKTIRNAMKIRDMSKCLEEFEQLCRAFLKSKTIVDKEGMPPFYIRLLSDLEDFLNQL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEIASYKENPMVSADEEDEKDEVESGV
SSDSDDEPGDAKSFLKKKPAAEALLPDSSKFLMGAADEESSSSSDVDDEDWDSDTAESGS
GSEDEEGNNAIAKIFLKKSGSEVERHTSEKKKEDRKKRHKRKERVEEEAEEEAQEEDEGE
WEKVKGGVPLVKMFAKGTEINTTVVVKKLNEILQARGKKGTDRAAQIELLHALANISNEN
ILGEGILVKIKFNIIASLYDYNPNLAAFMKADMWKKCLDCIDELLDILFNNNNIFIGENI
AEDSENLAIIDSQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEGRVCGII
DRLLGYLETKGSTEEVCRVYLRRIMHTYYKFDYKAHRRALGLQGETKSEQDAEESEGEDS
AFIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPP
VQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEK
IEKRRQVPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQ
PLLGPPESMREHVVAASKSMKMGDWRTCHSFIINEKMNSKVWDLFPETQCVREMLVRKIQ
EESLRTYLFTYSSVYDSISMETLKEMFELELPMVHSIISKMIINEELMASLDQPTQTVVM
HRTEPTSLQNMALQLAEKLGGLVENNERVFDLKQGVYGGYFNRDQKGYQQKQGGYNRDQR
GSYQQKQGGYNRDSQRGGYQQKQGGYNRDRGGYQQRQGGYNRDGGDYQPRQGSYNRDGNR
GGGGYQGQNRGGYQGGGGGYQGGGGGYQGGGGGYQGGGGGYRGGYQNQDRRDY

NT seq 3042 nt +upstreamnt +downstreamnt
atgtcacgtttctttgccaccggttccgacagcgagtctgaggattcctcgttgtctgat
gagatcacccctaaagtacccggcactacttttaccaagcagtcattgctgcttcgtgac
gatgaggaagacaccaagagagtggtgcgtagtgccaaggacaagaggttcgaggagcta
actaacctaatcaagacgatccgcaacgccatgaagatccgagatatgtccaagtgtctg
gaggagtttgagcagctatgccgagcattcctcaaaagcaagactatagtggataaggaa
gggatgcctcccttctacatccgtcttctgtccgacctagaagactttttaaatcagctt
tgggaggacaaagaaggcaagaagaagatgaacaagaacaacgccaaagcactcagcacc
ctgcggcagaagatccgcaagtacaacagggactacgagacggagattgccagctacaag
gagaacccaatggtctctgcggatgaggaggatgagaaggatgaggttgaatcgggggtg
tcgtcagatagtgatgacgagccgggagacgccaagagcttcctgaagaagaaaccggcc
gccgaggcacttctgccggacagcagcaagttcctgatgggagcagcggatgaggagtct
tccagcagcagtgatgtggatgacgaagactgggactcagacacagcggaaagcggcagt
ggtagtgaagacgaagagggcaataacgccattgccaaaatcttcctcaagaagtctggt
agtgaggtcgagcgacacaccagtgagaagaaaaaggaggataggaagaagagacacaag
cggaaggagcgtgtggaggaagaggcagaggaagaggcccaagaggaggacgaaggagaa
tgggagaaggtgaagggaggagtgcccctcgttaagatgtttgccaagggaacagaaatc
aacacaacagttgttgtaaagaaactcaacgagattctgcaggcccgtggaaagaaggga
acagacagagctgcccagatcgagcttctccacgccctggccaacatctccaatgagaac
attctgggcgagggcatcctggtcaagatcaagtttaacatcatcgcctccctgtacgac
tacaaccctaacctggccgccttcatgaaggctgatatgtggaagaagtgtctggactgc
attgacgagctgctggacatcctctttaacaacaacaacatctttatcggcgagaacatt
gccgaggacagcgagaacctggccattattgactcacagccattcagggtgcgcggctgc
attctgaccttggtggagaggatggacgaggagttcaccaagatcatgcagaacactgac
ccccactctcaagagtacgtggacaacttgaaggacgaggggcgtgtgtgcggcatcatc
gaccgcctgctgggctacctggagaccaagggcagcacggaggaggtgtgccgcgtctac
ctacgccgcatcatgcacacctactacaagtttgactacaaggctcaccgccgtgccctg
ggcctccagggagagaccaagtctgagcaggatgcggaggagagtgaaggcgaggacagt
gccttcatcatggaccgcctgtgcaagttcatctacgctaaggaccgcacagaccgcatc
cgcacatgtgccatcctgtgccacatctaccaccacgcacttcactcgcgctggtatcaa
gcccgtgacctgatgctcatgagccacctgcaggataatattcagcacgctgacccgcct
gtacagatcctgtacaacagaaccatggtgcagctggggatctgtgccttccgccagggc
atgatcaaggatgcccacaatgccctgctggacatccaatcgagtggccgcgccaaggag
ctgctgggccagggcctgctcatgaggaacatgcaggagaggaacgccgagcaggagaaa
atcgagaagaggcgacaggtgcccttccacatgcacatcaacctggagctgctggagtgc
gtgtacctggtgtctgccatgctgctggagatcccctacatggcggcccacgagtttgac
gcccgccgcaggatgatcagcaagcagttccaccaccagctgagggtgggcgagaggcag
ccccttctgggacccccagagagcatgcgtgagcacgtggtcgcggccagcaagtccatg
aagatgggcgactggcgcacctgccactcattcatcatcaacgagaagatgaacagcaag
gtttgggatctattccctgagacgcagtgcgtgcgagagatgcttgtcaggaagatccag
gaggagtctctgaggacttacctgttcacctacagcagtgtttatgactccatcagtatg
gagacactgaaggagatgtttgagctggagctgcccatggtgcacagcatcatcagcaag
atgatcatcaacgaagagctcatggcatccctggaccagcccacccagacggtggtgatg
caccgcacagagcccacctccctgcagaacatggccctgcagctggcagagaagctgggt
ggcctggtggagaataacgagcgcgtctttgacctcaagcagggagtctacggcggctac
ttcaacagagatcaaaaaggctaccagcagaagcagggtggctacaacagagaccagaga
ggcagttaccaacagaagcaaggcggttacaaccgagacagtcagagaggcggctaccaa
cagaagcaaggaggttacaacagagacagaggcggttaccaacagaggcaaggcggttac
aaccgagacggaggagattaccaaccgaggcaaggcagttacaaccgagatggaaaccga
ggcggtggtggctaccaggggcagaacagggggggctatcagggtggtggtggcggctat
cagggtggtggtggcggctatcagggtggtggtggcggctaccagggtggtggtggcggc
tacaggggaggctaccaaaaccaggacaggagagactactga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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