KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224384
Entry
112224384         CDS       T05605                                 
Name
(RefSeq) zinc finger protein 420-like
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112224384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112224384
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    112224384
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 TINF2_N zf-C2H2_4 zf-C2H2_6 PRP21_like_P zf-C2H2_jaz
Other DBs
NCBI-GeneID: 112224384
NCBI-ProteinID: XP_024243678
Position
LG25:complement(20159903..20182398)
AA seq 1047 aa
MRGHVSVKNVPPLPLPALRLMVPPLRLVSAAIWQTIQQSHVMDYGMLEEFVTMVTDVVPE
LLNDSQRAQLILGLRARLVLELCRSKPFTDLQTIQPHLDRIKTLAPLWGTQADAEVGLSE
SSFLGLVQTLLKDPDEREHFFQDVFPVEFGSSYDAAIQKLMWQFLSRLEKLLPVSNFQQA
ALLLSDSPSLLEECVQSVSHPQQLKTLLQYHRDLGQLDNHDTLSSSDGDCILSALCLPPV
ERVVIATEQTDSETHVSSLNVFMDTFTKELEVDSATLAKYTQMEPGTNIDVIAEDRVECK
RKEKASSVINDEEEDNSEFAETEEVEPAYETVLVLGEDGKMAPLVKTNKLKGLKRDRKDT
SGMPDGKKHRTPSPPQMKSIDLSDTIISSMLHKPSVELQRIDTANLTLPLEPVRRNRGRK
MKTLLARELKQTKTEFSEQKKRVCKRVKTPQNPNMCTVCGRVLSRFSDMKKHMQTHKNGR
TYQCRNCQKTFKHLYTLQTHRKSCLFGNGQQEEIPSVEGSSVPFTMCEAEFAQSSIDRRT
CKVCGKIVHRIGYLSTHMKIHSANRHYSLGESKAVQKASPEGEDTEPSSGVTLEATPEDS
DLSSTSTPQDPTYDPELSQIKRPKCSSTAKKSNRKTFQKPKHMCRICGKYVTAGAFEYHM
RTHSGERPFSCPHPQCGMKFIHSGGLRVHLRRYCKVRTVDAAELDSFNIRFECDKCEKTF
TIQSKLRKHKLIHGPLYCTGCRKVLPDLETLTRHKLWHRPVQCSMCEESFMLTNLRTHYL
DVHKFSGPFVCTHCPKSYKKFHSLIKHEMVHTGNLPLQCSQCPKRFIYNYDLVEHEKRHS
DDRPCLCWECGKAFCTNIDLKQHMQNSHGEKSTECRFPCRHCGKPFRLSNSRANHEKTKH
GGVRYPCTYCGKQFVCANALKRHDLIHTGERPFKCNHKSCDKAFRSRAELRIHTRYHTGE
RPFKCNVCGKGFVQANYLTTHYRTHTGEKPYSCSVCDKSFNYHDSLKRHMSTHSNEKPYK
CLDCGKAFERKTLLNVHKRSCTSLLKC
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgagaggacacgtttcagtaaaaaatgttcccccccttcctctccctgctctgcgcctc
atggtcccaccactgcgcctggtctcagcagccatctggcaaacaatccagcagagtcat
gtgatggattatgggatgctggaagagtttgttaccatggtcacagatgtggttccagag
cttctgaatgacagtcagagggcccaacttattctgggtcttcgagcacggctggtcctg
gagttgtgtcgctcgaagccgttcacagacctccagaccattcagccacacctggacaga
ataaagacccttgcacctctctgggggacacaggctgatgcagaggtgggattatctgaa
tccagcttcctggggctggttcaaacccttctgaaagacccagatgagagggaacatttc
ttccaggatgtttttcctgtagaatttggttccagttatgatgcagccatacagaaactc
atgtggcaattcctttcgagactggagaagctacttcctgtgtcaaacttccaacaggct
gccttgctgctcagcgactccccctctcttctagaggaatgtgttcagtctgtgtctcac
cctcagcagctgaaaaccctgcttcagtaccacagagaccttggccagctggacaaccat
gatactctgtcttcttctgatggggactgcattctctcagctctctgtctccctccagta
gaaagggtggtgattgcaactgaacagacagattcagaaacacacgtatcatccttgaac
gtctttatggatacattcaccaaagagttggaggtggactctgcaacactggcaaagtac
acacagatggaacccgggacaaatatagatgtaatagcagaggatagggtggaatgtaag
agaaaggaaaaagcatcctcagttattaatgacgaggaagaggataattcagagtttgct
gagaccgaagaggtggaaccagcgtatgaaacagtgttggttttaggggaagatgggaag
atggcacctttagtcaaaaccaataaactcaaagggctcaaaagagacagaaaggacacc
agtggcatgcctgatggaaaaaaacacagaacacctagccctccacaaatgaaaagcata
gacctgtctgatacgatcatatcgtccatgcttcacaagccctcagtggagctacaaagg
attgacaccgctaacctgacgttgcccttagaaccagtgagaagaaacaggggtcgtaag
atgaagacattgctagcacgagaattgaagcaaaccaaaactgaattttcagaacagaaa
aaacgtgtctgcaagagagttaaaacaccccaaaaccccaatatgtgcacagtgtgtgga
cgtgtcttatcccgcttttcagacatgaaaaagcacatgcaaacccataagaacggtcgc
acctatcagtgtcgcaattgtcagaagactttcaagcacttgtacactttgcaaactcac
agaaagtcatgtctgtttggaaatgggcaacaagaggagattccctctgtagagggcagt
agtgttccgtttactatgtgtgaggcagaattcgcacaatcctcaatagaccgtagaaca
tgcaaggtgtgcggcaagattgtgcatcgcattggatacttgagtacccacatgaagatt
cactctgcgaatcgtcactattcactcggcgaatcgaaagcagtccagaaagcatcacct
gagggagaagacaccgagccgtccagtggtgttactcttgaggcaacacctgaggacagt
gacctatcctccaccagtactccccaggacccaacttacgacccagaactcagccagatc
aaaagaccaaagtgctccagcacagcaaagaagtcaaaccgaaaaaccttccaaaaacca
aaacatatgtgccgtatttgtggtaaatacgtgactgctggagcctttgagtatcacatg
agaactcactcaggcgagcgccctttctcctgccctcatcctcagtgtgggatgaagttc
atacacagcggaggtttgcgggtccatctcagacgctattgcaaggttcggacagttgac
gctgctgagctcgacagcttcaacatacgttttgagtgtgacaaatgtgagaagacattc
acgatccaatcaaaactgaggaaacacaaacttatccacggcccgctctactgcacaggg
tgcaggaaggtattgcctgacttagaaactttaaccagacacaagctttggcacaggccc
gttcagtgcagcatgtgtgaggagagcttcatgctcacaaacctcagaacacactatctg
gatgtccacaagttcagcggaccgttcgtctgcacccactgtccgaaaagctacaagaag
ttccattccctcatcaaacacgagatggttcacaccgggaacctccccttacagtgctcc
cagtgtccgaagagattcatctacaattatgacctagttgaacacgagaaaaggcactct
gacgacaggccttgtctctgctgggagtgtggcaaggccttctgtaccaacattgacctg
aaacaacacatgcagaatagccacggtgaaaaatccacagagtgtcgtttcccatgtcgc
cattgtgggaaacccttcaggcttagtaattcccgtgcgaaccatgagaagactaagcat
ggtggggtgcgctacccgtgtacgtactgtggcaagcagtttgtttgtgcaaatgcattg
aaaaggcatgatctgattcacactggggagagaccttttaaatgcaaccataagagttgt
gataaggctttcaggtcgagagctgaactgaggatacacacgagataccatactggagag
cggccgttcaagtgcaacgtctgtggaaagggctttgttcaagccaattatctcactacg
cactaccggactcatactggggaaaagccgtattcatgttccgtctgtgacaaaagcttt
aactaccatgactccctgaagagacacatgtctacacactcaaacgagaagccttataaa
tgcttggactgtggaaaagctttcgaacgtaaaactctgttgaatgtacataaacgatca
tgtacatcattattgaaatgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system