KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224629
Entry
112224629         CDS       T05605                                 
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic-like isoform X1
  KO
K01640  hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00280  Valine, leucine and isoleucine degradation
otw00650  Butanoate metabolism
otw01100  Metabolic pathways
otw04146  Peroxisome
Module
otw_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    112224629
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    112224629
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    112224629
Enzymes [BR:otw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.4  hydroxymethylglutaryl-CoA lyase
     112224629
SSDB
Motif
Pfam: HMGL-like
Other DBs
NCBI-GeneID: 112224629
NCBI-ProteinID: XP_024244066
Position
LG25:34369213..34398637
AA seq 336 aa
MGNVPTSVKHCLSYEQLIQDYPWLGSRLQEEKCTLTREYPEYVKMIEVGPRDGLQNEKEM
VPTRVKIQLINMLSETGLPVIEATSFVSLKWVPQMADHTEVLQAIHRSSHARYPVLTPNM
HGFQDAVAAGATEVAVFGSASETFSQKNIYCSIDASMLRFEEVICTAKQQQIPVRGYVSC
ALGCPYEGPIEPTKVAEVVKRLYELGCYEVSLGDTIGVGTPGSMAKMLHYVMEEVPSSAL
AVHCHDTYGQALANILTALQMGICAVDSSVAGLGGCPYAQGSSGNVSTEDVLYMLHGMGI
KTGVDLSKVIEAGDFICKALNRKTNSKVAQARSKSS
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgggcaacgtccccacctcagtgaagcactgcctgagctatgaacaactcatccaggat
tatccgtggctaggaagccggctgcaggaggagaagtgcactttaacacgtgaatatcca
gagtatgttaaaatgattgaagttggaccaagagacggacttcaaaatgaaaaggaaatg
gttccgacaagagtcaaaatccagctgataaacatgctctcggaaacaggcctgcctgtg
atcgaggccaccagctttgtgtctttaaagtgggtaccacagatggcggaccacactgaa
gtgcttcaagccatccacagatcttctcatgctcgttatcctgtactgacacccaacatg
cacggctttcaggatgctgttgcagcgggtgctactgaagtggccgtgtttgggtctgcc
tctgagaccttcagtcagaaaaatatctattgctctattgatgccagcatgctgaggttc
gaggaagtcatttgcactgctaaacaacaacagattccagtccgtggatatgtttcttgt
gcactaggatgtccatatgagggacccattgaacccactaaagttgcagaggtggtaaag
cggttgtatgaactgggctgctatgaggtgtctctgggggatactatcggcgtgggcacc
ccaggctccatggccaagatgctgcactacgtcatggaagaggtacccagcagcgctctg
gccgttcactgccacgacacctacggccaggctctggccaacatcctaactgcactgcag
atggggatttgtgcggtggactcatctgtagcaggtctgggcgggtgcccatatgcccag
ggatcctctggtaacgtgtcaacagaagatgttctctatatgctccatggcatgggcatt
aaaactggagtcgatctctccaaggtaatagaggcaggtgatttcatctgcaaagcctta
aatcgcaagaccaactccaaggtagcccaagcaagaagcaagtcctcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system