KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112226072
Entry
112226072         CDS       T05605                                 
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00270  Cysteine and methionine metabolism
otw01100  Metabolic pathways
Module
otw_M00035  Methionine degradation
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    112226072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112226072
   03032 DNA replication proteins [BR:otw03032]
    112226072
   03036 Chromosome and associated proteins [BR:otw03036]
    112226072
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:otw02048]
    112226072
Enzymes [BR:otw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     112226072
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    112226072
DNA replication proteins [BR:otw03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    112226072
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112226072
Prokaryotic defense system [BR:otw02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    112226072
SSDB
Motif
Pfam: BAH DNA_methylase DNMT1-RFD DMAP_binding zf-CXXC
Other DBs
NCBI-GeneID: 112226072
NCBI-ProteinID: XP_024246057
Position
LG27:12399770..12413797
AA seq 1532 aa
MPANTSLFLPVDVRKRLEVLEKDEDGISDEDRVKEKVKLVQDFLHPDAQDQLSSLKAKMK
SSEISMDGYLSKVKALLGRELCVENGSHGDVVAQNCKNGKTNGSAANGDSHKEEDEDVIM
DTKEADAMKSPSAPKGKGGRKSKSDSEPKKSPGSRVTRNSVSGKQPTILSMFSKVQKRKS
DEVNGEVMNGEVTNGEVEEKEKVDRDTEEETQEEKRFKVEPDNKPVAEDATSEKIKAVAA
AKTPPPKCPDCRQYLDDSDLKLFQGDPDNALDEPEMLTDERLSLFDSNEDGFENYEELPQ
HKITNFCVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAW
WITGFDGGEKALIGFTTAFADYILMDPREEYAPIFAVMQEKIYMSKMVVEFLQKNPDVSY
EDLLNKIETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDL
IKLAGVTLGKSMLLYWRAARRQAIRHPTKIERDSKGGPTRATTTKLVYKIFDTFFSDQID
QNEKDGGIKRQRCGVCEVCLVPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAE
DDENIEEEELLPVKAPSKKVSKAKTKKQSNGKLTWVGDSIKTEGKKQYYMKVRMDNEVLE
VGDCVSVSSDDPSILLYLARITSLWEDNNGKWFHAHWFCRGTDTVLGESSDPLELFLVED
CEDMQLSYIEGKVNVMYKAPSDNWFMEGGMVEDIKVIDDDNGKNFFYQLWYEGDCARFET
PPTFTPQEDRKYNFCASCSRAEEREEQETPRVFEPIKDEDHDSKALYALACLKGEQFRVG
DSCYLPPDAYNFSVKAASPVKRPHRKEDVDEELYPEYYRKHSDYIKGSNLDAPEPFRVGR
IKEIFCHRRSNGKADVSEVKLRLYKFYRPENTHKGAKAGYHTDINQLYWSDEEVTVNMSE
VLGRCRVEYGEDLNETVQDFSSGGPDRFYFLEAYNAKSKSFEDPPNHARSAVNKGKGKGK
GKGKGKGKSSSVQEPPDQEPQDPKVPKLRTLDVFSGCGGLSEGFHQAGIAETLWAIEMWD
PAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSG
MNRFNSRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMG
YQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDDKKYF
SNVTRGNGGVYRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQPILKD
HICKDLSALVAARMRHIPLAPGSDWRDLPNMEVRLRDGTSSKKLRYTHPDKKNGRSSSGA
LRGVCTCSGGVPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP
MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSRAIGLEI
KKCVLERIKEENDNTKENEKENGKQEKMEVLD
NT seq 4599 nt   +upstreamnt  +downstreamnt
atgccagccaatacctccttgtttctgccagtggatgtcaggaaaaggctggaggtgttg
gaaaaagatgaagatgggatatctgatgaggaccgtgtcaaagaaaaggtcaagttggtg
caggacttcctgcatccggatgcccaggatcagctcagcagcctgaaagccaagatgaag
agttcagagatctcaatggatggctacctctctaaggtgaaggcccttttgggacgtgag
ctgtgtgtggagaatggctcacacggtgatgttgtggcgcagaactgcaagaatggcaaa
acaaatggctctgcagcaaatggtgactctcacaaggaagaggatgaagacgtaatcatg
gacaccaaagaggctgatgccatgaagtctccttctgcccccaaaggcaagggaggacgg
aagagcaagtcagactctgagcccaagaaatctcctggttccagagtcacaagaaactct
gtctctggaaaacaacccaccatcttatcaatgttctccaaagttcagaagcgcaagtct
gatgaggtgaatggagaggttatgaatggagaggttacaaatggagaagtggaagagaag
gagaaagtagaccgggacacagaggaagagacacaagaagagaagcgttttaaagtggag
ccagacaataagccagttgcagaggatgccactagtgagaaaataaaggcagtggctgca
gctaagactccaccccctaaatgtccggactgcaggcagtatctggatgactcggacctc
aagttatttcagggagatcctgataatgcgctggatgagccagaaatgttaacagacgag
cgcctctctctgtttgactcgaacgaagacggctttgagaactacgaagaactaccccag
cacaagattaccaacttctgtgtttatgacaagcgtggccacctgtgtccatttgactct
gggctcattgagaagaacgttgagctgtacttcagctgtgcagtcaagcctatctatgat
gacaacccctgcatggatggtggggttcctgccaaaaagcttggtcccatcaatgcctgg
tggatcactggttttgacggaggagagaaagccttaattggattcactacagcctttgcg
gactacatcctgatggatcccagggaggagtacgcccccatcttcgctgtgatgcaggag
aagatctacatgagcaagatggtggtggagttcctgcaaaagaaccctgacgtcagctat
gaggacctcctcaacaagattgagaccacagtgcctcctgctgggctgaacttcaaccgc
ttcacagaggacacactgctgcgccacgcccagttcgtggtggagcaggtggagagctac
gacgaggccggggactctgacgagcagccaatcatcgtcaccccctgcatgagggacctg
atcaagctggctggggtcaccctgggaaagagcatgctgttgtactggagagctgctaga
agacaggccatccgccatcccaccaagattgagagggacagcaaaggagggcccactaga
gcgactaccaccaagctggtctacaagatctttgacactttcttctctgaccagattgat
cagaatgagaaggatggcggaatcaaacgccagcgctgcggtgtctgtgaggtttgcctc
gttccagactgtggcaagtgttcagcctgcaaggacatgatcaagtttgggggtagtggt
cgcagcaagcaggcttgccagaagaggagatgccccaacctggcagtaaaggaagctgag
gatgatgagaacatagaggaggaagagttattgcctgtaaaggccccttcaaagaaggtg
tccaaggccaagactaagaagcagagcaatggcaagctgacctgggttggagactctatc
aaaactgaggggaagaagcagtactacatgaaggtgcgtatggacaatgaggtgctagag
gtgggagactgtgtttctgtcagctctgatgacccatcaatcctgctctacctggccaga
atcacatctctgtgggaggataacaatgggaagtggttccatgcccactggttttgccgt
ggtacagatactgtactgggggagtcctctgaccctctggagttgttcctggtcgaggac
tgtgaagacatgcagctgagctacatagagggcaaggtcaacgtcatgtacaaggccccc
tcagacaactggttcatggagggtggcatggtagaggacatcaaggtgattgacgatgac
aatgggaagaatttcttctaccagctgtggtatgaaggagactgtgcccgctttgagacc
ccgcccaccttcacaccccaagaggaccgcaagtacaacttctgtgccagctgtagtagg
gctgaggagagggaagaacaggagactcctcgggtgtttgaacccataaaggatgaggac
cacgactccaaggccttatatgctctggcctgcctgaagggagagcagttcagagtggga
gacagctgctacctgccccctgatgcatacaacttcagtgtgaaggcagcaagtccagtg
aagcgtcctcacaggaaggaggatgttgatgaggagttgtacccagagtactacaggaag
cattcagactacatcaagggctccaacctggatgcccctgagcccttcagagtgggacgc
atcaaggagatcttctgccacagacgcagcaacgggaaggctgacgtgtctgaagtcaaa
ctgcgcttgtacaagttctacaggcctgagaacactcacaagggggcgaaggcaggttac
cacacagacatcaaccagttgtactggagtgacgaggaagtgacagtcaacatgtcagag
gtgctgggccgttgtcgtgtggagtacggagaggacctgaatgagaccgttcaggacttc
tcctcaggtggacctgaccgattctacttccttgaggcttataatgccaagtccaagagt
tttgaggacccacccaaccatgcccgctctgctgtgaacaagggcaaggggaaagggaag
ggcaaaggtaaaggcaaagggaagtcatcttctgttcaggagcctccagaccaggagcct
caggaccccaaggtgcccaagcttcgtaccctggatgtgttctctggctgtggtgggctc
tctgaaggcttccaccaagctggtatcgccgagactctgtgggccatcgagatgtgggac
ccagcagcccaggcctttagactgaacaacccgggcaccacagtgtttacagaggactgc
aatgtgctgctaaagctggtgatgtctggagagaagacaaactccctgggccagcggcta
ccccagaagggagacgtggagatgctgtgtggaggccctccctgtcaaggcttcagcggc
atgaaccgcttcaactccagaacctactccaaattcaaaaactctctggtggtgtcttac
ctcagttactgcgactactacagacccaagttcttcctgcttgagaacgtgaggaacttt
gtctccttcaaaagttccatggtcctgaaactgactctccgctgtcttgtccgcatgggc
tatcagtgcacattcggagtccttcaggctgggcagtacggtgtagctcagacgcggcgc
agggccatcatcctggcggccgcgcctggggagaagcttcctcgctacccagagccccta
catgtgttcgctccccgggcatgctctctcaacgtggtggtggacgacaagaaatatttc
agcaacgtcacacgaggtaatggtggcgtgtacaggaccatcacagtcagggacaccatg
tctgacctgccagagatccgcaacggagcgtctgctctggagatctcctacaacggagag
ccccagtcctggttccagaggcagatcagaggcacacagtaccagcccatcctcaaagac
cacatctgcaaggacttgagtgcccttgtagcagcccgtatgaggcacatccccctagca
cctggctctgactggagggacctgcccaacatggaggtccggctgagggacgggacctca
tccaagaagctccgctacacccaccctgacaagaagaatggccgcagcagctctggagca
ctgaggggtgtttgtacttgttcaggaggggttccctgtgaccctgctgacaggcagttc
aacactctgatcccctggtgtttgccccacacggggaaccgccacaaccactgggccggc
ctctacggcaggctggagtgggacggcttcttcagcaccaccgttaccaaccctgagccc
atgggcaagcagggtcgtgtcctgcatccagagcagcacagagtggtcagtgtgagggag
tgtgcgcgctctcagggcttccctgatacctaccgcttctttggaaatgttctagacaaa
cacagacaggttggcaacgctgttcctccaccactctccagagccattggactagagatc
aagaagtgtgtcttagagcggatcaaggaagagaatgacaatacaaaagagaatgagaaa
gagaatgggaagcaggagaagatggaggtgttggactag

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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