KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112226599
Entry
112226599         CDS       T05605                                 
Name
(RefSeq) transcription factor E2-alpha isoform X1
  KO
K09063  transcription factor E2-alpha
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112226599
Transcription factors [BR:otw03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    112226599
SSDB
Motif
Pfam: HLH SR-25
Other DBs
NCBI-GeneID: 112226599
NCBI-ProteinID: XP_024246798
Position
LG28:8629546..8670289
AA seq 644 aa
MATVGTDKELSDLLDFSAMFAPPVSNGKNRPTTLASSQFGGSGIDERSGPGPWVSGEQNS
SSFNQGRGYGEGAHYNEHEGLASTPLFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRPTQESMDAQPKKIRKVPPGLPSSVYASASGEEYNRDG
AGYPASKPGNVGYPGSFYMQEGLHPSPDPWSSGGSMGQPGYSTAMLGNSPHLGQPTPFTA
INPQDRLKRQPLPLSPQNYPLHGSEVNGSFHSGSTGYGVSNHTSPINGTDTIMANRGTGS
SGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWPRGSGQATPSPNFEGGL
QALQNKMEDRLEEAIHVLQRHAGGQGGPGGLADMHSLLSAGIGGLAQAFNNAGLGLANRL
PSLMSNHHEDSTSGGVHGHHGPPSGSQPEGFTSLSRSTHSSSGSDIKREDKEDDENSSVA
DKSEDEKKDSKARTRTREMFSFQTFSSSLSDTGADSSSCSTASLNDENLTAEEKEKRDRE
RRSANNVRERVRVRDINEAFRELGKMVQVHLRSDKAQTKLIILQQAAQVIMGLEKQVRER
NLNPKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVSHM
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggctacagtgggaacagacaaggagctcagcgacctgctggatttcagcgcgatgttt
gcaccaccggtgtcaaatgggaagaacaggcccaccactctcgccagcagccagtttgga
ggctccggtatagatgagcggagcggtcctggcccctgggtatcaggagaacagaacagc
tcttccttcaaccagggacggggttatggcgaaggagctcattacaacgagcacgaaggc
ctcgcttccacccccttgttcggctcggggatcgttgggaaagctgagcgtggaccctac
tcttcttttggagcgcagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtcaccctcgggcctgaagtctggctcccagttctacccctcccaattcaaccct
cgcaggagacccacccaggagagcatggatgcccagccaaaaaagatcaggaaagttccc
cctggcctgccctcttcggtgtatgcatcggcctcaggagaggaatataacagagacggt
gcagggtatcctgcctccaagcctggaaatgttggctaccctggctccttctacatgcaa
gaaggcctgcacccctcccctgacccgtggagttctggcgggtcgatggggcagccgggt
tactctacagccatgctgggtaactccccccacctgggccagcctacacccttcacagcc
atcaacccccaggacagactgaaacgccagccgctgcctctctcgccccagaactacccc
ctgcatggcagcgaggtgaacgggagcttccactcaggatccactggctacggagtctcc
aaccacacgtcccccatcaacggaacagacaccatcatggccaaccgggggacagggagc
tcaggagatgagatcggcaaagccctagcatcgatttatccctcagaccacaacagcaac
accttcccatcatctccgtctactccagtgggctctccccaggccatagcaggttctgcc
tctcagtggccccggggctcgggacaggccacaccctctccaaacttcgagggtggactg
caggctctgcaaaacaagatggaggaccgtttggaggaggccatccacgtgctccagcgt
cacgccgggggacaagggggtccaggggggctggctgacatgcacagcctcctcagcgcc
gggataggagggctcgcccaggccttcaacaacgctggcctgggactggccaacagactg
cccagcctgatgtcgaaccaccacgaggactcgactagtgggggtgtgcatggtcatcat
ggccctccctctggcagccagcccgaaggcttcaccagcctctctcgctccacacactca
tccagtggctctgacatcaaaagggaggacaaggaggatgacgagaattcctctgtggct
gacaagtcagaggatgagaagaaagactcgaaggcccgcactcgaacaagagagatgttc
tccttccagaccttctcctcctccctatcagacacgggagcagacagcagcagctgcagc
acggcctcgctgaacgatgagaacctgacggccgaggagaaggagaagcgcgatcgggag
cggcgctcggccaacaacgtccgggagagggtgcgcgtgcgtgacattaacgaggcgttc
agggagctgggcaagatggtgcaggtgcacctgcgcagcgacaaggcccaaaccaaactg
atcatcctgcagcaggccgcgcaggtcataatgggtctggagaagcaggtccgagagcgt
aacctgaaccccaaggcagcgtgtctgaagcgcagggaggaagagaaggtttcgggggtg
gacccccagatgcagatgggaggtgggcaccccgggttaggcggcgatggacacaactct
gtcagccatatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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