KEGG T05605: 112228037

Oncorhynchus tshawytscha (Chinook salmon): 112228037

Entry

112228037         CDS       T05605

Name

(RefSeq) zinc finger E-box-binding homeobox 1-like

K09299

zinc finger homeobox protein 1

Organism

otw Oncorhynchus tshawytscha (Chinook salmon)

Brite

KEGG Orthology (KO) [BR:otw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112228037
Transcription factors [BR:otw03000]
Eukaryotic type
  Helix-turn-helix
   Homeo domain ZF
    112228037

SSDB

Motif

Pfam:

zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-Di19 Homeodomain zf-met zf-H2C2_5 zf-C2H2_6 zf_UBZ

Other DBs

NCBI-GeneID:

112228037

NCBI-ProteinID:

XP_042164515

Position

LG29:complement(2765615..2858650)

AA seq 1167 aa
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIAEEDGSLADGADCDSNVH
SEDHNVDRWDEVREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCARGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPTSHSSTTRTQTRDKPLQEQ
LPLNQIKSEPMDYEYKPMVVSPAAGATGVNGGAAAPLQGAVQAVMLPTMGLVSPISINLA
DLQNVLKVAVDSNMIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQDGNATKIII
NYSLDPSQTQTQLTAHNLKKEPPTLATTPGQAQAATEPSSKTQQKLPEDLTVSRPPRSKE
EKMEEETTKTCLLCNECPNGLDALHTLKHCKKASGLRINGDKSKSAIDSLLSEGFGDQPK
NLLSLLKAYFALNVEPTKEELSKISDSVSLPADVVKKWFDKMQSGQVSLGAPTPPSEEEG
PLSECHGAIVVSPKVRSEQNTESPTLMQSSPAEATPAEVNGSGPCPASPTPLNLTTGGAV
PAKPSSSDSTEVPLDLSLPKPLREETAATAASYQATVYSHQDEPLNLTKTCTTKKELPLS
AGHHMTSQTLSFYTAGPQSANPISIMTTQLPSGTIYAITDQGSTGVPCLRALTTNNNQTI
LIPQLAYTYTTTATASSPAGTETQEKTTLQINSIKEERQDTSSEVVYTMEEQNDSDTTPS
RNKMRKTESGLYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLIEHMR
LHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQGGGQGGVGEEVLEIESPVGLG
LGGEQPEQSDSRPTSSPPSHLDSDEQGSSTREEEEESDEEDMETVAGEAVEGDPDSILDM
DDIQVVRIGDEGGEEEEEEEREEEGEDTGQEGGENAEGEEQGVKRIVVGGEEEEGEEEEE
EGLVGVEVKEEQEEKEVTGEKAHTRQEEVKENREKEVEEEQSEQAQEEVKEETMDTEEAV
TSEEKEESGEVMKENEGETNGNTVSDD

NT seq 3504 nt +upstreamnt +downstreamnt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaatgtagtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcgcggaggaggatgggagtctggcagacggggctgactgtgacagcaacgtacac
agtgaagatcacaacgtagaccgctgggatgaagtgagggaggagtgtggttctgatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatctacccagaagcccctgaggacgagccccgccaggggacgcccgaggccagcgga
catgacgagaatggcactccggatgcgttctcacagctcctcacctgtccctactgtgcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccgaaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcatcacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgt
ttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgacccctgcctgccaaggcctcccaatgcccatccccagccatg
cccacctcgcactcctccaccacacgcacccagacccgagacaaacccttgcaggaacag
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatggtagtg
tctccagcagcgggggcaacaggagtgaacgggggtgcggctgccccactgcagggcgcg
gtgcaggcggtgatgctccccaccatgggcctggtctctccgatcagcatcaacctggca
gacctacagaatgtcttgaaggtggcggtggacagtaacatgatcagacagatgttggag
aacaatgctaagtcagcggggactggcatgggggcgacaggtgttcctcaccagcagctc
atctcagctatcagtctgcccattatgggtcaggacggcaacgccaccaagatcatcatc
aactacagcctggaccccagccagacacagacccagctcactgcccataacctgaaaaag
gagcccccgaccctggctacaacaccaggccaggcccaggctgccacagagccttccagc
aagacccagcagaaactcccagaggacctgacagttagcaggccccccaggagcaaagag
gagaagatggaagaggagactactaagacctgcctgctttgtaatgagtgccccaatggt
ctggacgctctccacacactcaagcactgtaagaaagcctcaggcctcaggatcaatggg
gacaaatcaaagtctgccatcgattcattattgtctgaggggttcggggaccagcccaag
aaccttctgtccctcctcaaggcctacttcgccttaaatgttgagcccaccaaggaggag
ctcagcaagatctccgactcggtcagcctgcctgccgacgtagtcaagaagtggtttgac
aagatgcagagtggtcaggtctcactaggggccccgacccctccgtctgaggaagaaggg
cccttgtctgagtgtcatggggccattgttgtgtcccctaaagtaagatcagagcagaac
acagagagccccaccttgatgcagtctagcccagctgaggccactccggctgaggttaac
ggctctgggccctgcccggcctcccctacaccactaaacctgaccaccgggggggccgtc
ccagccaaaccctcctcttcagacagcacggaggtccccctggacctgtcgctaccaaag
cccctccgagaggagaccgctgccaccgcagcctcttaccaagccactgtttactcccat
caggacgaacccctgaacttgacgaagacttgcacaaccaagaaagaacttccgctctct
gcaggccaccacatgactagccaaaccttgtccttttacaccgccggcccacaaagtgcc
aaccccatcagcatcatgaccactcagctgcccagcgggaccatctatgccatcactgat
cagggcagcacgggtgtgccctgcctccgggcgctcaccaccaataacaaccagactatc
ctcatcccacagttggcctacacctataccactacagctacagccagcagccctgcaggg
acagagacacaggagaagaccacactgcagatcaacagcatcaaggaggagcgtcaggac
acaagctcagaggtcgtgtataccatggaggagcagaatgactcagacaccaccccttcc
aggaataagatgaggaagacggagagtgggttgtacgcctgcgacctgtgtgacaagatc
ttccagaagagcagctctctgctccgacataaatacgaacacacaggcaagagaccccac
gagtgtggcatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgt
ctccactccggagagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcactca
ggctcttactcccagcacatgaaccaccgctactcctattgcaagaaggaggcgcaggga
ggaggtcagggaggtgtaggggaggaagtgctggagattgagagccccgtggggttgggc
ctgggaggggagcagccggagcagtcagacagcaggcccacctcctcccctccctcccac
ctggactcggacgagcaagggagcagcaccagagaggaggaagaggagagtgatgaggag
gacatggagacagtggcaggggaggcggtggagggagatccggacagcattctggatatg
gatgatatacaagtggtacggataggagatgagggaggggaagaggaggaggaggaggag
agagaggaggagggggaagacactggtcaggaggggggagagaatgcagaaggggaagag
caaggagtgaagagaatagtggtagggggtgaagaggaggaaggagaagaagaggaagag
gaggggttagtgggggttgaagtaaaggaagagcaggaagaaaaggaggttacaggggaa
aaggcacatacaaggcaagaggaggtgaaggagaaccgtgagaaggaagtggaggaggag
cagtcagagcaggctcaggaggaggtgaaggaggagacaatggacacagaggaagcagtg
acctcagaggagaaagaagaatcaggggaggtcatgaaagagaatgaaggtgaaacaaac
gggaacactgtttcagatgactag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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