KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112228297
Entry
112228297         CDS       T05605                                 
Name
(RefSeq) glucocorticoid receptor isoform X1
  KO
K05771  glucocorticoid receptor
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    112228297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112228297
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112228297
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 estrogen receptor-like
    112228297
Nuclear receptors [BR:otw03310]
 3. Estrogen like
  3C. 3-Ketosteroid receptor
   112228297
SSDB
Motif
Pfam: GCR Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 112228297
NCBI-ProteinID: XP_024249258
Position
LG30:complement(40621996..40729322)
AA seq 756 aa
MDPGGLKHSKDKGLAFGKLSESSVEGSFSGDTGGSKSTTSTSLMHLPGSRPQQPARDSAN
GLNVTTTQMETGGLTIEEAEVKVMEKALRMQQPQKPQQNQQLFENFALLEASIADLNRSN
TPGSSVLGRPHDLFSLKTENFSPMDKDRLDMGSVSFGQSQKDLDVNERLLGDNTMDILQD
LDLPGSLSDLNEFYVSDEAAFLSSLSVEDVLLEDGNMETKPIDCSNGGNCTNVDSADQQK
QLLEPGVSMPVIKTEEDADTSFIQLCTPGVIKQENDRRSYCQISNLDLPSTHNSAGSISG
PSYPYGANTSTAVSLQQDQKPVFGLYPPLPSVSDSWNRGNGYATGSGMSSSSFPVGFNSP
KARPEASGSASSAPAKPSGPTHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGWRARQ
NTDGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKNKKLIRLKGQQTTME
PNPPPPDERACALIPKSMPQLVPTMLSLLKAIEPEAIYSGYDSTIPDTSTRLMTTLNRLG
GQQVVSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCFAPDL
VINDERMKLPYMTDQCEQMLKISTEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQAVFD
EIRMTYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMQEMVGGLLQICFYTFVNKSLSV
EFPEMLAEIISNQLPKFKDGSVKPLLFHALNHDTMP
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggatccgggtggactgaaacacagcaaggacaagggcttggctttcggtaaactctca
gagagcagtgtagaaggaagcttctcaggtgacacaggtggttccaagtccaccacatca
acctccctgatgcatctgccaggctccagaccccagcaaccagccagagactccgccaac
ggactgaatgtcactacgactcagatggagacagggggactcactatagaggaggctgaa
gtgaaggtaatggagaaggcccttagaatgcagcagccacagaaaccgcagcagaaccaa
cagctgtttgagaactttgctctgttggaggcgagtattgcagatttgaatcgatccaac
accccagggagctctgtacttggacgccctcatgaccttttctctctgaaaacggagaac
ttctcacccatggataaagacaggcttgacatggggtcagtcagctttggacagtcacag
aaggacttggatgtcaacgagaggctccttggcgacaatacaatggacattctgcaggat
ttggacttgcctggctctctgtctgacctgaatgagttttacgtgtctgacgaggctgct
ttcctttcctccctgtcagtggaggatgtcctgctcgaggacggcaacatggaaaccaag
cccatagactgtagcaatgggggaaactgtacaaatgtggacagcgcggaccagcagaag
cagcttctggagccaggtgtctccatgcctgtcatcaagacggaggaggatgctgacacc
tccttcatccaactttgcaccccaggggtcatcaagcaagagaatgatcgtcggagctat
tgtcagatatccaacctggacttgcctagtacccacaactcggcgggctccatcagcggg
ccgagttacccctatggagcaaacacctcgacggcagtgagtcttcagcaggatcagaag
cctgtctttggcctgtatcccccactgccctcggtcagtgacagctggaacagaggcaac
ggatacgcgactggatcagggatgtcgagctcatcttttcctgtcggcttcaacagtcca
aaggcaagacccgaggccagcggctctgcgtcgtcagcccctgccaagcccagcggtcca
acccataagatctgcctggtgtgttcagatgaggcgtctggttgccactatggagtcctc
acctgcggaagctgcaaggtcttcttcaagagggccgttgaaggatggagagcacgacaa
aacacagatggacaacacaactatctgtgcgctgggaggaacgactgcatcatagacaag
atccgcaggaagaactgcccggcgtgccgcttccgcaagtgtctccaagcagggatgaat
ctggaagcgaggaaaaacaagaagctgatccgattaaaaggtcagcagacgacgatggag
ccgaaccctcccccacctgacgagagggcctgcgcgttgatccccaagtccatgccccag
ctggtacccaccatgctatccctgctcaaagccattgagccggaggccatttactctggc
tacgacagcaccattcccgacacctccacccgcctcatgaccaccctcaacaggctgggc
ggacagcaggttgtctcagccgtcaaatgggccaagtccctaccaggattccggaacctt
cacctggatgaccagatgaccctgctgcagtgctcctggctgttcctcatgtcgttcggc
ttgggctggcgctcctaccagcagtgtaacggggggatgttgtgcttcgcccctgacttg
gttattaatgatgagaggatgaagttgccatacatgaccgaccagtgtgagcagatgctg
aagatttccactgagtttgtgaggctgcaggtgtcctatgatgagtacctgtgtatgaaa
gtcctactgctgctcagcacagtaccaaaggatggattgaagagccaggctgtgtttgat
gagatccgcatgacctacatcaaggagctggggaaggccatcgtcaagcgggaagagaac
tccagccagaactggcagaggttctatcaacttactaagctattggactccatgcaagag
atggtggggggcctcctgcagatctgtttctacacatttgtgaataaatccctgagcgtg
gagttcccggagatgctggctgagatcatcagcaaccagttaccgaaattcaaagatggg
agcgtcaagccacttctgtttcatgccttaaaccatgacacaatgccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system