KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112235212
Entry
112235212         CDS       T05605                                 
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112235212
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112235212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112235212
Spliceosome [BR:otw03041]
 Common components
  Common spliceosomal components
   SR proteins
    112235212
SSDB
Motif
Pfam: RRM_1 RRM_3 Nup35_RRM_2 RRM_5 SET_assoc
Other DBs
NCBI-GeneID: 112235212
NCBI-ProteinID: XP_042156941
Position
LG18:38130252..38137157
AA seq 326 aa
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGRFPDRYGRGSQDSRRTNQPSGPPADR
NPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKN
ALEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSHS
PKARSPKRDYKRSRSRSHSGSPAPRAAAPGSPPPRAKETSSSSSSKRPSKPSKSASPNSP
PPAQRAPSRSPSRSRGSRSPSTDSRH
NT seq 981 nt   +upstreamnt  +downstreamnt
atgagtggctgccgcatatttgtcggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagaggggctttggt
tttgtggagtttgatgatcctagggatgctgaggatgcagtttatgagttggacggcaag
gagctctgcaatgagagagtgaccattgagcatgctcgtgtgcgcctgcgtggtgggcga
ggacgtggtggtgacagagggggaggaggaggaggaggaggccgcttcccagatcgctat
ggccgtggctcccaggatagtcggaggaccaaccaaccaagtggaccaccggcagatagg
aaccccccaccgatgcgtacggagaaccgtctcatcgtggagaacctgtcatctcgcgtc
agctggcaggacctgaaggatttcatgagacaggctggggaagtcacgtttgcagacgca
caccgccccaagctcaacgaaggggtggttgagttcgcttcttacagcgatctgaaaaac
gcccttgagaagctgtctggcaaggagatcaatggaaggaaaatcaagctgatcgaggca
gctaagaagaggggttccaggagtcgttcccgttcagagagctcttctcgttctcgctcc
cgttctcgtaaccggtccccgtcccgctccaggacccctcgtcgttccaggtcccactcc
cccaaagcccgctcccccaagagggactacaaacgctctcgttctcgttcccacagcggc
tccccagcgccccgtgctgctgcccctggctccccacccccgagggccaaagagacctct
tcctcctcctcctctaaacggccctctaagcccagcaagtctgcctcccccaactcccct
ccccctgcacagcgtgcgccttccaggtctccttccaggtctcgtggctctcgctctccg
tctacggacagccgccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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