KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112236639
Entry
112236639         CDS       T05605                                 
Name
(RefSeq) AP-2 complex subunit alpha-2 isoform X1
  KO
K11824  AP-2 complex subunit alpha
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112236639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112236639
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112236639
Membrane trafficking [BR:otw04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    112236639
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112236639
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 HEAT_2 RIX1 PDS5 IFRD
Other DBs
NCBI-GeneID: 112236639
NCBI-ProteinID: XP_024260993
Position
LG12:complement(67855173..67875468)
AA seq 1028 aa
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSDLISLINNAIKNDL
SSRNPTFMNLALHCIANVGSREMAEAFAAEVPRILVAGDTMDSVKQSAALCLLRLNRTSP
DLVLMGEWTARVVHLLNDQHLGVVTAATSLITTLAQKSPEDFKTSVSLAVARLSRIVSSA
STDLQDYTYYFVAAPWLSVKLLRLLQCYPPPEDGAIRGRLTECLETILNKAQEPPKSKKV
QHSNAKNAVLFEAISLIIHHDSEPTLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
FSHEAVKTHIETVINALKSERDVSVRQRAVDLLYAMCDRSNAKQIVAEMLSYLETADYSI
REEIVLKVAILAEKYAVDYTWYVDTILNLIRFAGDYVSDEVWYRVIQIVINRDEVQGYAA
KTVFEALQAPACHENLVKVGGYILGEFGNLIAGDSRSSPLIQFDLLHSKFHLCSVPTRAL
LLSAYIKFINLFPEVKGTIQEVLRSDSQLRNADVELQQRAVEYLRLSSIASTDILATVLE
EMPPFPERESSILAKLKRKKGPGNLHPDLDENRKERSANGGTADHSSTTSNAKSSPLSFV
GDLLAPASTAPPTNRPRPVSSSYLLQAPLTPIPPQASAVPVLLSAGPLFQVAASPTPSTD
LLGLGSTITTQNSAPPASKGTSLLVDVFSENIAAFPVETPVAVGPVADENFSSFLPNTPQ
VAYANATLPIAEEPEDKFVCKNNGVLYENQLLQIGLKSEFRQNLGRMYVFFGNKTSTQFM
NFAASVVCQDTLQAQLNVHAKPADPTVDGGAQLQQILNIECMSDFVDAPVLNIQFRYGGT
LQNVAVKLPITLNKFFQPTEMTSQDFFQRWKQLGAPQQEVQKIFKAKHSMDTEVTKAKIM
GFGAALLDGVDPNPSNFVGAGVIHTKTTQVGCLLRLEPNTQAQMYRLTLRTSRDTVSQRL
CDLLSEQF
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgcctgcagtctctaaaggagatggaatgcgtggcctcgctgtgtttatatcggacatt
aggaactgtaaaagtaaagaagcagagatcaagagaattaacaaagagttggccaacatc
cgctcaaaatttaaaggagacaaagcactagatggatacagtaagaagaaatatgtgtgc
aagctgcttttcatattccttcttggccatgacattgactttggccacatggaggcagtc
aacctgctcagttccaacaagtacacagagaaacaaattggttacctgttcatctcagtg
ttggtcaactcaaacagtgacctcatcagccttatcaacaatgctataaagaatgacctg
tccagcaggaatcccactttcatgaacctggccttgcactgcattgccaatgtgggcagc
agggagatggctgaggcttttgcagctgaggtgccccgcatcttggtggctggggacact
atggacagtgtgaagcagagtgctgccctgtgcctactgcgtctcaacaggacctctcca
gacctagtgctcatgggggagtggaccgcccgggtggttcatctgcttaatgaccagcac
ctgggtgtggtgaccgctgccaccagcctgattaccacactggcacagaagagcccagag
gacttcaaaacatctgtctccttggctgtagccagactcagcaggatcgtctcttcggcc
tccactgacctgcaggactacacctactattttgttgcagctccctggctttctgtcaag
ctcctgcgtctcctacagtgctatcctccgcctgaggatggtgcgatccggggccgtctg
accgagtgtctggaaaccatcctgaacaaggcccaggagcctcccaagtcgaagaaggtg
cagcactccaacgctaagaacgctgtgctgtttgaggccatcagtctaataatccaccat
gacagcgagcccactctgctggtgcgggcctgtaaccagctgggccagttcctccagcac
cgggagactaacctgcgctacctggccctggagagcatgtgcaccctagccagctccgag
ttctcccatgaggccgttaagacacacattgagacggtcataaatgccctcaaatcagag
agagatgtcagtgtgcgtcagcgtgctgtggacctgctctatgcaatgtgtgaccgcagc
aacgccaaacagattgtagcagagatgctcagctacctggagacggcagactactccatc
agagaggagatagtgctaaaggtggccatcctggcagagaagtatgcagttgactacacc
tggtatgttgacaccatcctcaacctgatccgcttcgctggggactatgtcagtgacgag
gtctggtaccgcgtcatccagatcgtcatcaacagagatgaagtgcaaggttatgctgcc
aagacagtgttcgaggcactccaggccccagcctgccatgagaacctggtaaaggtcgga
gggtacattctaggggagtttgggaacttgatagcaggagattcaaggtcaagtccactc
atccagtttgacctgctccactccaagtttcacctgtgctcggtgcccacccgggctttg
ctgctctcagcctacatcaagttcatcaacctgttccctgaggtgaagggcaccatccag
gaggtgttgcgctcagacagccagctccgcaacgcagacgttgagctacagcagcgtgct
gtggagtacctgcgcctcagctctatcgccagcactgacatactggccacggtgttggaa
gagatgcctcccttccctgagagggagtcatctatactggccaaactcaagaggaagaag
ggaccaggaaacctgcatcccgatttggatgagaaccgcaaagaacgcagtgccaatggg
ggtactgcagaccatagcagcactacctcaaatgctaagagctctcctctctcgtttgtt
ggggatcttctggcccccgcctcgaccgcaccccccaccaaccggccacgtccggtctct
tcttcctacctcctgcaggcccccctcacccccattcccccccaggcctctgctgtccct
gtgctgctttctgctgggcccctctttcaggtggccgcgtcccccactccctccacagac
ctgcttggcctgggcagcaccatcaccactcaaaattctgcccctcctgcctccaagggg
acaagcctgctggtggatgtcttctctgaaaacatagcagcctttcctgtagagacacca
gtggcagtggggcctgttgcagatgagaacttctccagtttcctgccgaatactccacaa
gtagcatatgccaacgctactctgcccattgcagaggaacctgaagacaagtttgtttgc
aagaacaatggtgtcctatacgagaaccagctcctccagattggcctgaagtctgaattt
agacagaatttgggtcggatgtatgtgttctttggtaacaagacatcaacccagttcatg
aatttcgctgcctctgtggtctgccaagatactctgcaggctcaactgaatgtccatgcc
aagcctgcagaccccactgtggatgggggtgcacaactccagcagatactcaacattgag
tgtatgtctgactttgtggatgcacctgtgctcaacattcagtttaggtacgggggaact
ctccagaacgttgctgttaaactgcctattacgttaaacaagtttttccagcctacagag
atgacatcgcaggacttctttcagcgctggaaacaacttggagcccctcagcaagaggta
caaaagattttcaaagcaaagcattccatggatacagaggttaccaaagccaagataatg
gggtttggtgctgctttgctggacggggtagatccaaacccctccaactttgtgggcgct
ggtgtcatccatacaaagaccacccaggttggctgcctcttgagactggagcctaatact
caagcacagatgtaccgcttaacactaaggacaagcagagatactgtgtcgcagcgcctg
tgtgatctgctctcagaacaattctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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