KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112239707
Entry
112239707         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-13
  KO
K17925  sorting nexin-13
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:otw04990]
    112239707
Domain-containing proteins not elsewhere classified [BR:otw04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   112239707
SSDB
Motif
Pfam: PXA Nexin_C PX RGS Rep3_C
Other DBs
NCBI-GeneID: 112239707
NCBI-ProteinID: XP_042165904
Position
LG31:30147187..30207049
AA seq 954 aa
MFAEASLSVWGWGGLGVVLFLITFGPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSERHLE
RCEHSYLPATQTGILKTLDEMRLEPKPIQIDRRLTGSNYIDEPLQQVIQFALRDYIQYWY
YTLSEDDSFLLEIRQTVQNALVQFSTRSKEVDWQPYLTTRLVDDFATHLRVFRKAQDRLE
DSKQRDLSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPGDFH
NKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDRVSE
LEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLMFVKKVCETRIQRLQSGKEVDALKL
AANLGKLCIIPLEHILVHNIALQFFMDYMLVAGAQAELFFWLTVEGYRVTAQQQLEVMEG
WQKDGRKGGDTKGLLKAAALGVYEQYLSDKASPRVQVDEASVLQLGEKLQKDSDPTPEIF
NDIQTTVYDMMLRDERFYPSFRQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSPTGS
INLSLDDLSNSCHDDNIQLHAFISDTGVCNDHGKTYALYAITVLRRNHDGSEDSWKTYRR
YSDFHDFHMRITEQVKFENLTAILKLPGKKTFNNMDRDFLERRKKDLNSYLQLLLNPEMM
KACPTLVHYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKGLPDSLAGGMN
KAADNMGRMSEKLGQDIKQAVFKVPPMLPKSDFDPEHCRVSAQLDDNVDDNXPLRVMLLL
MDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRD
SYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQ
HGPMNRRLVYVLLEGFLETMFPHYKFPELFVKLHSRSPRTARYTQKVKSTFPKR
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgtttgcagaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttt
ctcatcacttttggacccttcgctgtcttctacctggccttctatatcttctgcttcgta
ggaggtggttttgcggtcactctgttgtttgggaaaaccaactcagagagacatctagag
aggtgtgaacactcctatcttccggccacacaaacgggtatactgaagacattggatgag
atgaggctggagccgaaacctatacagatagataggagactgactggctccaactacata
gacgagcctcttcaacaggtcatccagtttgctttgagagattatatccagtactggtat
tacactctgagtgaggatgattcttttctgctggaaatcagacagacggtccagaatgct
ctggtacagttctccacacggtctaaagaggtggactggcagccttatttgaccaccaga
ctggtggatgactttgctactcaccttcgagtcttcagaaaggcccaagacagactggag
gacagtaaacagagggacttgtcggaggagatggtggagtcattctttgaggcggaggtg
gagatggagaggaacatctgtagagacgtggtctgcacctccctgaaggatgaagaaggg
ttcctcagggatctgtgtgaggtgctgctctacctgttactacctcctggagacttccac
aacaagaacatgagatacttcctcagggagattctggcgcgaggcgttctccttcccctg
gtcaaccagctgagtgatcctgattacatcaaccagtttgttatctggatgatccgggac
tctagctgtaactacgaggcttttatgaacatcttgaagctgacagacagagtgtctgaa
ctggaggctgttaaagacaaggccctggaggaactacagtacctacgatcactggacacc
gcaggagacgatatcaatgtaataaagaaccagatcaacagtctgatgtttgtgaagaag
gtctgtgagaccaggatacagaggctacagtctgggaaggaggtggatgctctgaaacta
gcggcaaacttgggcaagctgtgcatcataccactggagcacattctggtacacaacatt
gccctgcagttctttatggactacatgctggtggctggggcccaggcagagctgttcttc
tggctgacagtggagggctacagagtaacagcccagcaacaactagaggtgatggaggga
tggcagaaggatggaaggaagggaggagacactaaaggactgctgaaggctgcagcacta
ggggtgtatgaacagtacttatctgataaggcgtcccccagggtgcaggtagatgaggcg
tctgttctccaactgggagagaagctgcagaaggacagcgaccccacaccagagatattc
aacgacatccagaccacggtgtatgacatgatgcttcgtgatgagaggttttacccgtcg
ttcagacagagtcctctctacatcaggatgttagctgagctggacatgctcaaagaaccc
tcctatagaggatcggatgacggagacggagaatcgttcaacggttctccaacaggaagt
attaatctgtctctggatgacctgtcgaactcctgccatgatgacaatatacagctacac
gccttcatctccgatacaggggtgtgtaacgaccacggcaagacctacgccctctacgcc
atcactgtgttgcgccgtaaccacgacggcagcgaagactcctggaagacctaccgacgc
tactctgacttccacgatttccacatgaggatcacggagcaggtgaagtttgagaatttg
acggcgatcctgaagctgccggggaagaagacgtttaacaacatggacagagacttcctg
gagaggaggaaaaaagacctgaactcgtacctacagctgctgctgaatccagagatgatg
aaggcctgtcctactctggttcactacgtctacgacttcctggagaataaacagtacagc
aaggggaagggggatttcgctcgcaagatggatacgtttgtgaacccgctgcggagctcg
atgcgtaatgtgtccaacgctgtgaagggcctgccagacagtctggctggagggatgaac
aaggctgctgacaacatgggacgcatgtcagagaaactgggacaggacataaaacaggct
gtgttcaaggtgcctccaatgctccccaagtctgactttgacccagagcactgccgagtc
tcggcccagctggatgacaatgtagatgataacnatcccctgcgtgtgatgctgctgttg
atggatgaggtgtttgacctgaaggagaggaaccagtggctccgcaggaacatcaagaac
cttctgcagcaactcatcagagccacatacggagacactatcaacaggaagatcgtggat
catgtggacttcatgacagctccagaacaggtggccgactacgtcaagaagttccgggat
tcgtactggcccaacggaatcctggccgagtctccaccacgcagggacaagaacatccgc
atgaggacgagggtcgcggccaagaccaacctattgggaatcatgccagatgagttgaag
cacatcatcggggcggatacgactcgtaagggaatcctgcgtgtgtttgacatgttccaa
cacggaccaatgaatcgtcggctggtctacgtgctcctagaaggcttcctggagaccatg
ttccctcactacaagttccctgagctgtttgttaaactccactctcgctcgccgcgcaca
gccagatacacacagaaagtcaagagcaccttcccgaagaggtga

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