KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112244880
Entry
112244880         CDS       T05605                                 
Name
(RefSeq) peroxisome proliferator-activated receptor delta isoform X1
  KO
K04504  peroxisome proliferator-activated receptor delta
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320  PPAR signaling pathway
otw04148  Efferocytosis
otw04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    112244880
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    112244880
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    112244880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112244880
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112244880
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    112244880
Nuclear receptors [BR:otw03310]
 1. Thyroid hormone like
  1C. Peroxisome proliferator-activated receptor (PPAR)
   112244880
SSDB
Motif
Pfam: zf-C4 Hormone_recep HiaBD2
Other DBs
NCBI-GeneID: 112244880
NCBI-ProteinID: XP_024268499
Position
LG02:44960508..44998359
AA seq 529 aa
MEGTRATILAPVRSDDPRRDRKRRVGGPVRKGGVCQDRTASPHGECTSDGEKEPESALKE
LKPNPLGKWDTEGERGAELSPEGEDVLCSWEMDSQDQEKEEGKQKGSSNSQSTSNTDSPA
PSSSCTDLSQTSSPSLSDQLFLGREEGTGAGINVECRICGDKASGFHYGVHACEGCKGFF
RRTIRMKLEYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGRMPEAEKRKLVA
GLLAGDTAPTTNPNGSDLKSLAKRVNNAYLKNLNMTKKKARSILTGKNSSSPVAYPYPFV
IHDMDSLHQAENGLVWNQLINGTPPNKEIGVHVFYRCQCTTVETVRELTEFAKSIPGFVD
LFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRRPFSEIMEPKF
EFAVKFNALELDDSDLALFVAAIILCGDRPGLMNIKQVEEIQDSILQALDQHLLGNHADS
HYLFPKLLNKMADLRQLVTENAMLVQKIKKTESETSLHPLLQEIYKDMY
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggagggcaccagggccaccatcttggcgccggtcaggagcgacgaccctcggcgggat
cggaagcggcgtgtcgggggtcctgtaaggaaggggggtgtctgccaggacaggacagcc
tccccacatggggagtgcacctcggacggagagaaggagccggagtcagccttgaaggaa
ctgaaaccaaacccgctgggcaaatgggatactgagggggagcgaggagcggagttgtcg
cctgagggggaggacgtcctttgctcctgggaaatggactctcaggatcaggagaaagag
gaggggaaacagaaggggagtagtaacagccagagcacctccaatacggatagccctgcc
ccctccagcagctgcacagatctgtcccagacgtcgtctccatcgctgtcggaccagctc
ttcctgggtcgagaggaagggacgggggccgggatcaacgtggaatgtcggatctgtgga
gacaaagcctcggggttccactacggagtacacgcctgtgaaggctgcaagggctttttc
cgccggaccatccgtatgaagctggagtacgagcgctgtgagcgcagctgtaagatccag
aagaagagcaggaacaagtgccagtactgccgcttccagaagtgcctgctgctgggcatg
tcccacgacgcgatccggtacggccgcatgccggaggcggagaagaggaagctggtggcg
ggccttctggcgggagatacggccccgaccaccaaccccaacggctcggacctcaaatcc
ctggccaagcgggtcaacaacgcctacctgaagaacctcaacatgaccaagaagaaagct
cgcagcatcctcaccggcaagaatagctccagcccggtagcgtatccatatcccttcgtg
atccacgacatggactcgttgcaccaggctgagaacgggctggtgtggaaccagctgatc
aacgggacgccgcccaacaaggagataggggttcacgtgttctaccgctgccagtgcacc
acggtggagacggtcagggagctcacggagttcgccaagagcatccccggctttgtagac
ctcttcctcaacgaccaggtgacgctgttgaagtacggcgtgcacgaggccatcttcgcc
atgcttccctcgctcatgaacaaggatggactgctggttgccaacgggaagggctttgtg
acccgggagttcttgcgcagtctgcggcggccctttagcgagatcatggagcccaagttt
gagtttgccgttaagttcaacgccctggagctggacgacagtgacctggccctgtttgtg
gccgccatcatcctctgtggagaccgtccggggctgatgaacatcaagcaggtggaggag
attcaggacagcatcctgcaggccctagaccagcacctgctgggcaaccacgctgactcg
cattacctcttccccaagctgctcaacaagatggccgacctgcgccagctggtcacagag
aacgccatgctggtccagaagattaagaagactgagtcagagacctcactgcacccgctg
ctgcaggagatctacaaggacatgtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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