KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112248307
Entry
112248307         CDS       T05605                                 
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145  Phagosome
otw04540  Gap junction
otw04814  Motor proteins
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112248307
  09144 Cellular community - eukaryotes
   04540 Gap junction
    112248307
  09142 Cell motility
   04814 Motor proteins
    112248307
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112248307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112248307
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:otw04812]
    112248307
   04147 Exosome [BR:otw04147]
    112248307
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112248307
Cytoskeleton proteins [BR:otw04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112248307
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112248307
  Exosomal proteins of colorectal cancer cells
   112248307
  Exosomal proteins of bladder cancer cells
   112248307
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 112248307
NCBI-ProteinID: XP_024272987
Position
LG04:complement(22027949..22030689)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcatcttcaggctggacagtgtggaaaccagatcggcgctaagttc
tgggaggtgatcagtgacgagcatggcattgacccaactggtacataccatggggacagt
gaccttcagctcgacaggatcaacgtctactacaatgaagcctcaggtggtaaatatgtg
cctcgtgccgtgcttgtcgacttggagccagggaccatggactctgtgagatctggaccc
ttcggccagatcttcagacctgacaactttgtgttcggccagagtggtgctggaaacaac
tgggccaagggccactacacagagggagctgagctggtggactcagtcctggatgttgtg
aggaaggaagctgagagctgtgactgtctgcaaggtttccagctcacccactcactagga
ggtggaaccggctctggcatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gatcgcatcatgaacaccttcagcgtggtgccctcacccaaagtatcagacactgtggtg
gagccctacaatgccaccctgtcagtccaccagctagtggagaacactgatgagaccttc
tgcattgacaacgaggctctctacgacatctgcttccgtaccctcaaactcactactccc
tcctacggtgacctcaaccacctggtgtcggcaactatgagcggtgtcacaacctgcctg
cggttcccaggacagctcaacgctgacctccgtaagcttgctgtcaacatggtgccattc
ccccgtctccacttcttcatgcccggcttcgcccccctcaccagcaggggaagccagcag
taccgctccctcactgtgcctgagctcacccagcagatgttcgatgccaagaacatgatg
gccgcctgcgacccccgccacggacgctaccttacagtggctgccatcttccgtggacgc
atgtccatgaaggaagtggatgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgttgaatggatccccaacaatgtcaagactgcagtctgcgacattcctccccgtggc
ctcaagatggctgctaccttcatcggcaacagcacagccatccaggagctgttcaagcgt
atctcagagcagttcacagccatgttcaggcgtaaggctttcctccattggtacaccgga
gaaggtatggacgagatggagttcactgaggctgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaagatgccaccgctgaggaggagggagagtttgaagaggaggga
gaagaggagctggcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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