KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112248480
Entry
112248480         CDS       T05605                                 
Name
(RefSeq) PDZ and LIM domain protein 2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112248480
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:otw04990]
    112248480
Domain-containing proteins not elsewhere classified [BR:otw04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   112248480
SSDB
Motif
Pfam: PDZ DUF4749 PDZ_6 LIM PDZ_2 Ogr_Delta
Other DBs
NCBI-GeneID: 112248480
NCBI-ProteinID: XP_024273309
Position
LG04:complement(28468676..28529263)
AA seq 371 aa
MALTVNLIGPSPWGFRIYGGRDFKKVITVSKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQMLVERPEPPIPEQTNGTTTPEQLTGRFQEAVLVSRDENQNYRG
YSISSPASLSPGLYSPEAPSSPEGKRERLTPTGTKSIQLRSWSPEEKTSSHRLSRPLSQE
FSSPDFRTNSVTSRTPTPPGHYSPHSPIDRELSVSPRRSSGSDFAMQRFDRDSEVYKMIQ
ENKESRTAPRQSNTFHMLQEVLEADEKEATVRFPGLSPKPTPPKPTSPGGGVPKYHTCEK
CGTSIVTQAVRIMHDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHARENYQGLG
TAPCATVSPRH
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggcgctgacagtaaacctgattggtccgtctccatggggctttagaatatacggagga
agagacttcaagaaggtgataacagtttccaaggtcaatgggggcagcaaggccgagttg
gccgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactccaaaactcagctgcagatgctggtg
gagaggcctgagccccccatccctgaacagaccaatggaaccaccaccccagaacagctc
actggacgcttccaggaggcggtgctggtgagtcgagatgagaaccagaactacagaggg
tactccatctccagcccagcctctctgtcacctggactctactccccagaggctccgtcc
agtcctgagggaaagagagagaggctcacacccaccggcaccaagagcatccagctgcgt
tcgtggtctccagaagagaagacatcgagtcacagactgtccagaccactgtcacaggag
ttctcttctccggacttcaggactaactctgtgaccagtcgaacccccacccctccagga
cattactcgccccacagccctattgaccgcgagctgtctgtctcccccagacgcagttct
ggctcggactttgccatgcagcggtttgaccgggattcagaggtctacaagatgatccag
gagaacaaggagtctcgcacggcccctcgacagtccaacaccttccacatgctgcaggag
gttctggaggccgatgagaaggaggcaactgtgcggtttccaggactctcgcccaaaccc
acccctcccaaacccacatcacccgggggcggagtccccaagtaccacacctgtgagaag
tgtggcaccagcattgttacacaggcggtgcgcatcatgcacgaccgcttccgccaccca
gagtgctacacctgttctacaccagagtgcggactcaacctgaagatgcgaggtcacttc
tgggtgggagaggagatgttctgtgagaagcatgcccgcgagaattaccagggccttggc
actgccccctgtgccaccgtctcaccccgccactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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