KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112248524
Entry
112248524         CDS       T05605                                 
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine isoform X1
  KO
K05039  solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:otw02000]
    112248524 (si:ch211-225b11.1)
Transporters [BR:otw02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   112248524 (si:ch211-225b11.1)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 112248524
NCBI-ProteinID: XP_024273399
Position
LG04:31523237..31579441
AA seq 608 aa
MGVGSEKTSSTTKGVYKEETDIALKAPLNVNAMLSKKVGHATAERATWGRRLEFVLASVG
YAVGLGNVWRFPYLCYRSGGGAFLIPYFLMLFLCGIPLLFMEFAIGQYTRLGPVHALATI
CPLFKGVGIATVVISFVLCTYYNVLMSWALYYFFNSFRAIFPWQSCNNTWNAVGNCSSGF
PGNATHLQSASQQYFDHRVLEITNGIEDAGGLRWELFGILILAWVIVYLCIFKGVKSTGK
VVYFTATFPYFILFALLINNVQLPGAKDGMLYFLKPKWSKLLEVQVWVNAAAQVFNSIGI
GFGSMISMASYNKFNNNILRDTLIVSLANSATSILAGFVIFSAIGYMAHVHNLPVDNIAT
DGPGLVFVVYPEVFSTMPLPQLWAPLFFFMLLCLGLDSQFAMVEVAVTSIIDGFGPKVLR
VLKRQEVIVLAVCVMGFLLGIPHITKGGMYVFQLMDHYTAVVSLMFLSFFEVIAVCWVFG
LRRMTIMIKRMLGKAPNIYFRSCWMVFSPVLVLCILISSIIQYTPARYGKSYTYPVWAEV
VGWGISLVSIVWIPLGALQEICRNKGSLLQRVKTAVTPTIELDPVNPLPEEQSEDTPESV
FLSIITPL
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgggagtggggtccgaaaagacatcatccaccaccaagggagtctacaaagaggagact
gatattgctttgaaagcacctttaaacgtgaatgctatgttatcaaagaaagtggggcac
gcgacagcagaaagagccacctggggtcgccgccttgagttcgtcctcgcgtcagtgggg
tacgcggtgggacttgggaacgtgtggcgctttccatacctctgctacaggagcggtgga
ggtgcctttctcattccttactttctcatgctgtttctgtgtggcatcccccttctcttc
atggagtttgctattgggcagtacacccgtctgggaccggtgcatgctctagccacaatc
tgccccttgttcaaaggtgtgggcattgcaacagtcgtgatctcctttgtgctctgcacc
tactacaacgttcttatgagctgggcactctactacttcttcaactcattccgagccatc
ttcccctggcagtcctgcaacaacacctggaatgccgtgggtaactgctccagcggtttc
cctggaaacgccacccacctgcaatcagccagtcagcagtactttgatcacagggttctg
gagataaccaatggtattgaggatgcaggaggactacgctgggagctgtttggcatcctc
atcctggcctgggtcatagtctacttgtgcatcttcaaaggcgtcaaatcaactggcaag
gttgtttatttcacagccacgttcccatactttattctgttcgccttgctcatcaacaat
gtccagcttcccggggccaaggatgggatgctctacttcctgaagcctaagtggagcaag
ctgcttgaagttcaggtgtgggttaacgctgcagcccaggtattcaactccattggaatt
ggatttggctccatgatctccatggccagttacaacaagttcaacaataacatccttagg
gacacattgattgtctctttagctaactcggccaccagtatcctggctggctttgtgata
ttctcagcaatcggctacatggctcatgtccacaacctcccagtggacaacatcgccaca
gatggtcctggcttggtgtttgtggtgtatccagaggtcttctccactatgcctctgcca
cagttgtgggctcctctgttcttcttcatgcttctgtgcctgggactggacagccagttt
gccatggtggaggtggcggtgacgtccataatagatggcttcggccctaaggtgctgcgt
gtcctgaagagacaggaggtcatcgttctggccgtctgtgttatgggcttccttctaggc
attcctcacatcactaaggggggcatgtatgtgttccagctgatggaccactacactgct
gtggtgtcgctcatgttcctgtccttctttgaagtcatcgctgtctgctgggttttcgga
ctgcgtcggatgaccatcatgatcaagagaatgttgggaaaggctcccaacatctatttc
cgctcctgctggatggtcttctcccctgtgctggtcctgtgcattctgatctccagcatc
atccagtacacgccagctcgctatgggaagtcatacacataccctgtctgggcagaggtg
gtgggctggggaatctccctggtctccatcgtgtggatcccactgggagccctgcaagag
atctgcagaaataagggctcactgctgcagagagtaaaaacagctgtgactcctacaata
gagttggatcctgtcaaccctctgccagaggagcagagcgaagacacaccagagtctgtt
ttcttgtctatcatcactcctctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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