KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112249174
Entry
112249174         CDS       T05605                                 
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
  KO
K12391  AP-1 complex subunit gamma-1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142  Lysosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    112249174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112249174
Membrane trafficking [BR:otw04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    112249174
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptinC2 Cnd1 Kinetochor_Ybp2 Katanin_con80
Other DBs
NCBI-GeneID: 112249174
NCBI-ProteinID: XP_024274653
Position
LG04:complement(64155604..64184694)
AA seq 820 aa
MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLSEKNHGVLHTSVVLLTEMCERSPDMLLHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGRSDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSKRW
HIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVSS
WCIGEYGDLLVSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLSTRF
SSVNRIKKVVSIYSSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPTEI
MQTNGETEPSVPDTKHLPLVTQPANQANDLLDLLGGNDVVPVIQTTLPTKPASAGGELLD
LLGDLSLSGGLAPAPSVPVSQPPFLLDGLSSQPLFNDTSAAIPPMTAYSKNGLKIEFTFE
RANPNPNIAVITIHATNTTEADMTEFVFQAAVPKTFQLQLLSPSSNIVPALNQGSVTQVI
RVLNPQKQQLRMRVKLTYTHKGSPVQDLAEVNNFPPQSWQ
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgccagcgccgatcagactgcgggagctgatccggaccatccggacggctcggacccag
gcagaggagcgtgagatgatccagaaagagtgtgctgctatacgctcgtccttcagagag
gaagacaacacttaccgctgtagaaatgtggctaagctactctacatgcacatgctgggc
tacccagcgcactttgggcagctggagtgcctgaagttgattgcgtcccagaagttcact
gacaaacggatagggtacttgggagccatgctactgttggacgagaggcaggacgtccat
ctactaatgacaaactgcatcaagaatgatctgaatcacagcacacagtatgtccagggc
ctggccttgtgcaccctgggctgcatgggctcctcagagatgtgtcgagacctggctgga
gaggtggagaagctgctcaaaacctccaactcctacctgaggaaaaaggcggcgttgtgt
gcagtccacgtcatcaggaaggtcccagagttgatggagatgttcctcccagccacaaaa
aacctgctgagcgagaagaaccacggtgttctccacacttctgttgtcctcctcactgaa
atgtgtgaaagaagtcctgacatgctcttacacttcagaaagaatgagaagttggttcca
cagctggtgagaatcctgaagaacctgatcatgtctggttactctcctgagcatgacgtg
tctggcatcagtgaccccttcctgcaggtgcggatattgagactattgcgaattctgggc
aggagtgatgacgactcaagtgaagcaatgaatgacattcttgcacaggtggcaaccaac
accgagacaagtaaaaatgtaggcaatgcaatcctctacgagacagtactgaccataatg
gacatcaagtcagaaagtggattgagggtgttggctatcaacatactgggacgcttcctt
ctcaacaacgacaaaaatattagatatgtggcactgacatccctactgaagactgtacag
acggaccacaatgcagtgcagaggcatcggagcaccattgtggactgtctaaaagacctg
gatgtgtccatcaagaggcgtgcgatggagctgagcttcgccctggtgaatgggaacaac
atccgaggcatgatgaaggagctgctctacttcttggactcctgtgacccagaattcaaa
gcggactgtgcgtccggcgtcttcctggctgcagagaaatatgcgccttcaaaaagatgg
cacattgacaccatcatgagagtcctgacaacggcggggagctatgtccgagacgactct
gtccccaacctcatccagctcatcaccaacagtgtggagatgcatgcctacacggtgcag
agactctacaaagccctgctggatgacatctcacagcaaccactggtccaggtgtcatcc
tggtgtataggggagtatggagacctgctggtatctggacagtgtgaggaggaggagccc
atccaggtgacagaggatgaagtcctggatgttttggaaggtcttcttgtgtccaacttg
tccacccctgtaacccgtggttactccctcactgccatcatgaagctgtctactcgcttc
agcagtgtcaaccgaatcaagaaggtggtgtcaatatacagcagcagcatcgacgtggaa
ctgcaacagagagctgtggagtacaatgcacttttcaagaaatatgatcacatgaggcct
gccttactggagcgaatgcccatcatggagaaaacggcctccaatggccctacagagatc
atgcagaccaatggggagacagagccctcggtgcctgacacaaaacacctgcccctagtc
acccagccagccaaccaggctaatgacttgttagacctgctgggaggtaatgatgtggtg
cctgtgatccaaaccaccctgcccaccaagcctgcctcggctggaggagagctgctcgac
ctactgggggacctctcactgtctggtggtctagctcctgctccctctgtgcccgtctcc
cagccccccttcctcctggatggtctctcctcacagcccctgtttaatgatacttcagca
gctattccccccatgacagcgtatagcaagaatggcctgaaaatagagttcacctttgag
agggccaacccgaatccgaacatagcagtcatcactatccacgccaccaacaccactgag
gctgacatgacagaatttgttttccaggctgcagtaccaaagacattccagctgcagctc
ttgtcccctagcagtaatattgtcccagcactcaaccagggaagtgtcacacaggtcatc
agagttctcaacccacagaagcaacaactccgcatgagggtcaagctgacgtacacccac
aaaggctcacctgtccaagacctggccgaggtcaacaactttcctcctcagtcctggcaa
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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