KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112250627
Entry
112250627         CDS       T05605                                 
Name
(RefSeq) transcription factor HES-1
  KO
K06054  hairy and enhancer of split 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460  Fanconi anemia pathway
otw04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    112250627
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    112250627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112250627
   03400 DNA repair and recombination proteins [BR:otw03400]
    112250627
Transcription factors [BR:otw03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    112250627
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     112250627
SSDB
Motif
Pfam: Hairy_orange HLH
Other DBs
NCBI-GeneID: 112250627
NCBI-ProteinID: XP_024276705
Position
LG05:44835322..44837321
AA seq 278 aa
MCGRDISDGQKMPADMMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRAR
INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGK
YRAGFSECTNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQISAGPPHPS
FGQSMVQMPNSSPQGNVMPLPCKGGSPQSMSPEATKVYGGFQLVPATDGQFAFLIPNAAF
APNGPVIPVYANQVNTPVPAAVSPGAPTGNSDSVWRPW
NT seq 837 nt   +upstreamnt  +downstreamnt
atgtgtggaagggatatttcagacggacagaagatgcctgccgatatgatggaaaaaaac
tcatcctctccggttgctgctaccccagccagcatgaacacgacacctgataaacccaag
acggcttccgagcacaggaagtcatccaaacctatcatggagaaaaggagaagagccaga
atcaacgaaagcttgggacagttgaaaacacttatcctggacgcgctcaaaaaagatagc
tctagacactcaaaacttgaaaaggcagacatcctggagatgacggtgaaacacctccgg
aacctccagagagcgcaaatgactgctgcgttgaacactgatcccaccgtgctggggaaa
tacagagctggattcagcgagtgcacgaatgaagtcacccgtttcctatccacctgcgag
ggggttaacaccgaggtcaggacgcggcttctcggtcacttggccagttgcatgacgcag
atcaacgctatgaactaccccacacagcaccagatttcagccgggcctccccacccctcc
ttcggccagtccatggtacagatgcccaactcatctccgcaaggcaacgtgatgcccctg
ccttgtaaaggtggctctccccagagcatgtcaccagaagccactaaagtatacggcggt
ttccagctcgtacctgccacagacggacaattcgccttcctcatccccaacgcagctttt
gcacccaacggtccggttatcccggtgtatgcgaaccaggtcaacacgcctgttccagcg
gcagtgtcccccggtgcaccgacaggcaactcggactcagtgtggcgaccctggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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