KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112251045
Entry
112251045         CDS       T05605                                 
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
  KO
K01968  3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00280  Valine, leucine and isoleucine degradation
otw01100  Metabolic pathways
Module
otw_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    112251045
Enzymes [BR:otw01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.4  methylcrotonoyl-CoA carboxylase
     112251045
SSDB
Motif
Pfam: CPSase_L_D2 Biotin_carb_N Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C ATP-grasp ATPgrasp_ST Biotin_lipoyl_2 RimK ATP-grasp_3 ATP-grasp_4 MCC_alpha_BT Ntox43 RnfC_N
Other DBs
NCBI-GeneID: 112251045
NCBI-ProteinID: XP_024277470
Position
LG05:61851211..61859838
AA seq 721 aa
MASVLNVQTLQGLRIFQQSVSCLVLLLSHLRKLIWTKGFVRFASIGQGRIEKVLIANRGE
IACRVMRTAKKMGVRSVAVYSDADRHSMHVAMADEAYNIGPAASQQSYLSMEKVMEVAKR
SGSHAVHPGYGFLSENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIE
GYHGEDQSDEKLQAEAVRIGYPVMIKAVRGGGGKGMRIAHTTEDFHEQLESARREARKSF
NDDVMLVEKFVEDPRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISKEVR
RKLGEAAVRAAKAVNYVGAGTVEFIMDAQHNFFFMEMNTRLQVEHPVSEMITGTDLVEWQ
LRVAAGERLPLLQEEIELMGHSFEARIYAEDPNNDFLPGAGPLLHLSTPLADECTRIETG
VREGDEVSAHYDPMIAKLVVWGEDRSAALRKLRYCLRQYNIVGLNTNIDFLLSLSGHPEF
EAGNVTTSFIPQHYEQLFPKPIPPSRATLCQAALGLLLRERASTQTFRDQSNDPFSPFAS
SNGRRVNILYSRNMMLQLGETKVELTVTYNPDGTYSMEIGGEVFQVSGEVETQGQTSFLH
CSVNGVKSRPKLVILDNTVHLFSMEGSAEVSIPVPKFLAGVSTGAQGGAVAPMTGTIEKV
LVKAGDTVQMGDSLMVMNAMKMEHIIRAPKAGVIKKVFFKDGSQANRHAALVEFEEAAEE
E
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcttctgtcctgaatgttcaaaccctacagggtttaagaatatttcaacagtccgtg
tcctgccttgttcttttattatctcatcttaggaaattgatatggaccaaaggatttgtg
cggtttgcctcaattgggcaaggcaggatagaaaaagtcctcattgccaacagaggagaa
atcgcctgccgtgtgatgcgaacagcaaagaagatgggtgtgcgctctgtggcagtatac
agtgatgcagatcgtcattccatgcatgtggccatggcagatgaggcctataacattggg
ccagccgcatcccagcagagttacttgtccatggagaaagtcatggaggttgccaagaga
tctggatcacatgctgtccacccaggatatggcttcctgtcagagaacacagagtttgct
gaggcatgcaaacaggagggtatcatctttattggccctccatcatctgctatcagagac
atgggtatcaaaagtacatcaaaatacataatgtcagctgcgggtgttcctatcatcgag
ggttaccacggagaggaccaatcggatgagaagctccaagctgaggctgtcaggataggc
tatccagtgatgataaaggctgtgcgtggcgggggtggtaaaggaatgcgcattgcacac
accactgaagacttccacgagcagcttgagtctgcgagacgagaggctcgcaagtccttc
aatgatgatgtcatgctagtggagaaatttgtagaggaccccagacatgtggaggtccag
gtttttggggaccagcatggaaatgctgtctacctgtttgagagggattgcagcgtgcag
agaaggcaccagaagatcattgaggaagcaccaggtcctggaattagcaaggaggtgagg
cggaaactgggtgaggcagccgtgagagcagccaaagccgtcaactatgtgggagcaggc
actgtggagttcatcatggatgcacagcacaacttcttcttcatggagatgaacacgcgt
ctgcaggtggagcaccctgtgtctgagatgatcactggtactgacctggtggagtggcag
ctcagagtggctgcaggggagaggctgcccctcctgcaggaggagatagaactgatgggc
cattcgtttgaggccaggatatacgctgaggaccccaacaacgacttcctccctggggca
ggacccctccttcatctgtcgacacccctggcagacgagtgcacacgcatcgagacaggc
gtcagggaaggagatgaagtgtcagcccactacgaccccatgatcgctaaactggtggtg
tggggagaggaccgctctgctgctctgaggaagctcagatactgcttacgtcagtacaac
attgtaggcctcaacaccaatattgacttcctgctgagtctgtctggccacccagagttt
gaggcggggaatgtgaccaccagcttcatcccccagcactatgagcagctgttccccaag
cccatccctccctccagggccacactgtgtcaggctgccctgggcctgctgctcagagag
agggccagcactcaaaccttcagagaccagtccaatgatcccttctctccttttgcctcc
agtaacggcaggagggtgaacatcctatatagtaggaatatgatgctccagctgggtgaa
actaaagtggaattaacggttacatataatccagatgggacctactctatggagattgga
ggggaagtgttccaggtgtcaggggaggtggagacacagggacagacatcattcctgcac
tgctctgtgaatggggtgaagtcccggcccaaactggtcatcctggataacacagtacac
ctcttctctatggagggtagtgcggaggtgagcattccagtacccaagttcctggctggt
gtgagcacaggagcacagggaggagctgtggcacccatgactgggaccattgagaaggtg
ctggtgaaggcaggagacacagtacagatgggagactccttgatggtgatgaatgccatg
aaaatggagcacatcatccgagcacccaaagctggagtcatcaagaaggtgtttttcaag
gatggctcccaggccaaccggcacgcagccctggtagagtttgaggaggccgctgaggag
gaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (36)   

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