KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112252477
Entry
112252477         CDS       T05605                                 
Name
(RefSeq) nuclear factor of activated T-cells 5 isoform X1
  KO
K17335  nuclear factor of activated T-cells 5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112252477
Transcription factors [BR:otw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) NF-AT
    112252477
SSDB
Motif
Pfam: RHD_dimer RHD_DNA_bind TIG
Other DBs
NCBI-GeneID: 112252477
NCBI-ProteinID: XP_024279489
Position
LG06:35263740..35283451
AA seq 1444 aa
MPSDFISLLSADLDLNSPKSLYSKESVYDLLPKELQLQSSSSQTDTPTMSQKSGGEAGPP
PSAAMASATSPSPSPSSLATGGPSSAPSTSAMDQSQPPLLLHHPSGAPREGSGAPEGSER
EGVEGALSASEGGGGNGTSSGTGGGDPGAPGAGGVGSQQQPQNTPSKRRPVLSISPPPED
LFDDSSMSCQEDPAPAGPAGPDSEHSSSIWADDSASNFSLISSSSYNDNTEVPRKSRKRT
PRQRPGAKPAPPEDSMDVFDADSATAPHFVLSQLGPDKASPKPSSLEAGWLLKGGLLSGQ
CPQKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGVSEPVVLQVFVA
SDTGRVKPHGFYQACRVTGRNTTACKEVDIEGTTVIEVPLEPSSAMSLAVDCVGILKLRN
ADVEARIGVAGSKKKSTRARLAFRVNIPQPDGSVLTLQTTSSPILCTQPAGVPEILKKSL
HSCSVRGGEELFIIGKNFLKGTKVIFQENSADDESWRAEAEIDMELFHQNHVVVKVPPYH
SLSVSSPVSVGVYITTNAGRSHDIQPFMYIPDSAEKSLNMSVKTEGSSLAKACIFHDQIN
YLASDPAQSAGELVKRQEVTPMEVSSNTPSTALFKPPSDTLILVQQTLELSSSTPPRNES
FPGPMPLQPGDMDLPHAPVFPSLEPFSTIQKQDITPITSFPVSSDTTTLPPVPPEVPQQF
LRDPQESLPQEASNSCSGMMVVGMSQMVPPSQAPQVPLFPQDGVAQLERAVRELQAGGSS
LVQQVLEAAVAQQQLNSVLYSPTSSTDSLQQNVQDTMNSLRLGCTEGSLATQQQLQQQQI
LGNMQQIQQQQQQIQQQQQIQQIQHQVLGNIQLQPQLLIQPQDQQLQQQQQILGNLQQQQ
QQLQHQQFQQQQQVLGNIQLPDQQLQQQVLGNLQQQNQAVGSMQHLQQQQQQQQQQVLEN
FQQQLQAELLQPQIHSSSHPQQQPVALLQQAGELLTIQTSSFPHQPPSHTSPQQLLQSPR
PLSESPSPQHQVQAALLQNTLTVLTSGSRDHEQQVTGSTLFLSPNTLSSQGSQQQLAFLS
SMETSASDPQTVSVFQSQTQQQQSTPMDQQQSPQQTQPQQTQQQLPMAQQGSLFQTNTLS
SSQHPQPQPTDLLLCTASLNPQALPPTLLFSTQGLSMGSSTPHPQDTPAPLLFSQPTMVG
IRVGVAQSDPAEPMSFQDQSSTVGGTTASINPPQQGLFQAQQPMQVSSSSGSGPDSQQVE
LFLPQGSLSGLQSNMATQELENQAAAAATIFVMQSGLGVVELQSTASPPGQRPPEQLFQT
GVSRNVGQPGGQPNLFVFGLQTDSSQLMTSTGSTLSAQSQPQNANPVRASHIQSLLDSDM
AQTATPMQTNLQTPMQTNIHTAMQTNIQTAIEPSLPTVMQTSLQNAIQTTSQKMEDLLDS
LQKQ
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgccctctgattttatatccctcctcagcgctgatctcgaccttaattcccccaaatcc
ctttactccaaagagtctgtgtatgacctcctccctaaggagctccagctgcagtcgtcc
tcctcgcagacagacacacccaccatgagccagaagagtgggggagaggccggaccaccc
ccttctgcagccatggcctcagccacctcacccagcccttctccatcctctttggccacg
ggaggccccagctcggccccctctacctcagccatggaccagtcccagcctcctctcctc
ctccaccatcccagtggggcccccagagaggggtccggagccccagaaggatccgagagg
gaaggggtggagggagctctgtctgcctctgaaggtggaggcggcaatgggaccagctct
ggaacaggaggaggagacccaggagcaccaggggcagggggggtgggatcccagcagcag
ccccagaacaccccctctaagcggaggccagtgttgagcatctccccccctccggaagac
ctgtttgatgacagcagtatgtcctgccaggaggatccagccccggccgggccagcagga
ccagactcagaacacagcagcagcatctgggctgacgactcggcctccaacttcagcctg
atcagctccagctcctacaacgacaacacagaggtgccccgcaagtcccgtaaacgcacc
ccccgccagcggcccggggccaagcctgcacccccagaggacagcatggacgtgtttgat
gcagacagcgccacggccccacactttgttctgtctcagctgggcccagacaaggccagc
cccaagcccagttctctggaggctgggtggctgctgaagggaggcctgctgtcaggtcag
tgtccccagaagagtgagggcaaggagctgaagatcctggtgcagccagagacccagcac
cgggcacgctacctgaccgagggcagccgcggctctgtcaaagaccgcacccaacagggc
ttccccacggtcaagttagagggcgtcagtgagccggtggtgctgcaggtgtttgtggcc
agtgacacaggcagagtgaagcctcatgggttctaccaggcctgcagggtgacaggacgc
aacaccacggcctgcaaggaggtggacatcgagggaaccaccgtcatagaggtccctctg
gagcccagcagcgccatgtcacttgcggttgactgtgtggggatcctgaagctgcgtaac
gcggacgtggaggctcgtataggagtggccgggtccaagaagaagagcacccgggccagg
ctggcattcagggtcaacatcccccagcctgatgggtctgtcttaaccctacagaccacc
tcgtcacccatcctctgcacccagccagcaggggtgccagagatcctgaagaagagtctc
cacagctgttcagtgagaggaggagaggagctgttcatcatagggaagaacttcctgaaa
ggaaccaaggtcatcttccaggagaactcagcagatgatgagtcgtggcgggccgaggca
gagattgacatggagctgttccatcagaaccatgtggtggtgaaggttccgccataccac
agcctgtctgtctcctctcctgtctctgtgggcgtctacatcacgaccaatgccgggagg
tcacatgacatccagcccttcatgtatatcccagactcagcagaaaagtccctgaacatg
tctgtgaagacagagggttcttctctggccaaggcctgcatcttccatgaccagatcaat
tatctggcctctgatccagcccagtctgctggcgaactggttaaacgacaggaggtcacc
cctatggaggtctccagcaataccccatccacagcactcttcaagccaccgtctgacacc
cttatcttagtccagcagacccttgagctgagctccagcaccccgcctaggaatgagtcc
ttccctggccccatgcccctccagcctggggacatggacctcccccatgcccctgtcttt
ccctccctggagcccttcagcaccatccagaagcaggacatcacccccatcacctccttc
cccgtctccagtgacactaccaccctcccccctgtccccccagaggtaccccagcagttc
ctccgggacccccaggagagcctgcctcaagaggcctccaactcctgcagcgggatgatg
gtagtaggaatgtcccagatggtgcccccctcccaggccccccaagttcccctgtttccc
caggatggggtggcccagctggagagggcagtaagggagctccaggcagggggcagcagc
ctggtacagcaggtcctagaggcagcagtggctcagcagcaactcaactcagtgttgtac
agtcccacgtcctccactgactccctgcagcaaaacgtacaggacaccatgaacagcctg
agactggggtgcactgagggctctctggccacacaacagcagttgcaacaacagcagatc
cttggcaacatgcaacagatacaacagcagcaacaacagatacagcagcaacaacagata
cagcagatacagcatcaagtccttggcaacatacagctacaaccacaattattaatacag
ccacaggatcaacaactgcaacagcaacaacagatactggggaacctacaacagcaacag
caacaattacaacatcaacagtttcaacaacagcagcaggtcctaggaaacatacagcta
ccggatcaacaacttcaacaacaagtactgggcaacctacaacaacaaaaccaagcagta
ggcagcatgcaacacttacagcaacaacaacaacaacagcagcagcaggtgttggagaac
tttcagcagcagctccaggctgagctcctccagccccagatccactcctcgtctcatccc
cagcagcagcctgtggctctcctccagcaggctggggagctgctcaccatccagacctcc
agcttcccccaccagccgccctcccacacctccccccagcagctcctccagtcccccaga
cctctgtcggaatcccccagcccgcagcaccaggtccaggccgccctgctccagaacact
ctcactgtgctgaccagtggtagccgagatcatgagcagcaggtcacggggtccacgctg
ttcctctctcccaacactctctctagccagggtagtcagcagcagctagcattcctgtcc
tccatggagacttcagccagtgatccccagactgtgtcagtgttccagtctcagacccag
cagcagcagagcacccccatggaccaacagcagtccccccagcagacacaaccacagcaa
acccagcagcagcttcccatggctcagcaaggctccttgttccaaactaacactctgtcc
tccagccaacaccctcagccccagcccacagacctgctcctctgcaccgcctccctcaac
ccccaggctctgcctccaaccctcctcttcagtacccagggcctctctatgggcagcagc
acccctcacccccaggacacccctgctcccctcctgttctcccagcccaccatggtcggg
atcagggtaggggtggcccagtctgacccagcagagcccatgtccttccaggaccagagc
tccacagtaggggggacaacagcctccatcaatccccctcagcagggcctgttccaggcc
cagcagcctatgcaggtgagctctagctcaggcagtggccctgacagccagcaggtggag
ctgttcctgccacagggttctctgtctggtctgcaaagcaacatggctacgcaggaacta
gaaaaccaggctgcagcagctgcaaccatctttgtgatgcagagcggactgggggtggtg
gagctgcagagtaccgcctccccccccggtcagagacccccagagcagctgttccagacg
ggagtgagtaggaatgtcggccagccaggaggacaacccaacctttttgtgttcggcctc
cagaccgattcctcccagctgatgacgtccactggttcaacactgtcagcccagagccaa
ccccagaacgccaaccctgtgcgggcaagccacatccagtctctactggactcagacatg
gcccagacagccacacccatgcagaccaacctacagaccccaatgcagacaaacatacat
actgcaatgcagaccaatatacagactgccatagaacctagcctgccaaccgttatgcag
accagcttacagaacgccatacagaccacctcccagaagatggaggacctgctggacagt
cttcagaagcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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