KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112252716
Entry
112252716         CDS       T05605                                 
Symbol
nr2c1
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1 isoform X1
  KO
K08543  testicular receptor 2
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112252716 (nr2c1)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112252716 (nr2c1)
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    112252716 (nr2c1)
Nuclear receptors [BR:otw03310]
 2. Hepatocyte nuclear factor 4 like
  2C. Testicular receptor
   112252716 (nr2c1)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 112252716
NCBI-ProteinID: XP_024279979
Position
LG06:52598299..52623100
AA seq 628 aa
MDRQTQRIQLVSADGGMMGHRIQIVTDQSTGQKIQIVTALEQGSGGKQQFILANADYSTA
GKVILAKQEASSPGKVILAAPDGSGVNQLLFASPDLAGQQIQFVTEGSDQALSKPVVEYC
VVCGDKASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRLQRC
MVLGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETARYY
KETARSTSLLESSMLLNIQQPFPKLENTILLPTSPESNDPCQGDLSTLANVVTSLAHLNK
AREMSDITDGNDLMGVDDTLSNGDSSMADLQGDEQTASDITRAFDTLAKALNPGDGSAGD
SLEATLQLMSGDQSGPVVELEGPLLSDSHVPFKLMMPLPMPEYLNVNYICESASRLLFLS
MHWARSIPAFQALGGLDNDINLMKACWNELFALGLAQCANVMNVATILAAIINHLQTSLQ
EEKHLLSQSHKKLSPERVKLVMEHIWRMQEFCNSMAKLSPDSYEYAYLKAIVLFSPDHPG
IDNTLQIERFQEKAYMELQDYVTRTYPEDSYRLSKLLLRLPALRLMSAAVTEELFFAGLI
GNVQIDSIIPYILKMESTDYNSQVAPGV
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggacagacagactcagaggattcagctggtgtcagctgatggtggcatgatgggacac
cgtatccagattgtgacagaccagtccacgggccagaagatccagatcgtcactgcattg
gagcagggttctggtgggaagcagcagttcatcctggctaacgcagactactccacggca
ggcaaggtaatcctagccaaacaagaggcctcgtccccgggcaaggtgatcctggcggcc
ccagacggttcaggggtaaatcagctgctgtttgcctcccctgacctggctggccagcag
atccagtttgtgacggaagggtcagaccaggccctttccaagcccgtggtggagtactgt
gtggtgtgtggagacaaggcatcaggtcgtcactatggggcagtgagctgtgagggctgt
aagggtttcttcaaacgcagcatcaggaagaacctggtttatacatgcagggggtccgga
gagtgtgtcatcaacaagcaccacaggaaccgctgccagtactgcagacttcagcgctgc
atggtcctgggcatgaaacaggactccgttcagtgtgagaggaagccggtggaggtatcc
agagagaagtctatcaattgtgctgcatctacggagaagatctacatcaggaagaacctg
tgtagtcctctggctgccacgcccaccttcgtcaccgacaaggaaaccgccaggtactac
aaggagacagccagatcaaccagtttgctggagtcgagcatgctcctcaacatccagcag
ccattccccaagctggagaacaccatcctgctcccgacatcccctgaatcgaatgaccca
tgtcagggtgacctgagcaccctggccaacgtggtgacatcactggctcacctgaacaag
gcccgggagatgagcgacattacagacggcaatgacctaatgggtgtggacgacaccctt
agcaacggagacagctcaatggcggatctccaaggagacgaacagaccgccagtgacatt
acgcgagcgtttgacaccctggccaaggccttgaatcctggtgatggctcagcgggagac
tctctggaggccacgttgcagttgatgtcaggggaccagtcaggccctgtggtggagctg
gaggggccccttctctcagacagccacgtccccttcaagttgatgatgcctttgcccatg
cctgagtacctaaacgtgaactacatctgtgagtcggcctcaagactcctcttcctgtcc
atgcactgggcgcgctccatacctgcctttcaagccttgggtggtctcgataatgacatt
aacctgatgaaggcttgttggaatgagctgtttgctctgggcctggctcagtgcgccaac
gttatgaatgtcgccaccatcctggctgccatcatcaaccacctgcaaaccagcctacaa
gaagagaagcatctgctgagtcagagccacaagaagctgtccccagagcgagtgaagctg
gtgatggaacacatctggaggatgcaggagttctgtaacagcatggccaaactgtcccct
gactcgtatgaatacgcctacctcaaagccatcgtcctctttagccctgaccacccaggc
attgacaacaccttacagatcgagcggttccaggagaaggcttacatggagctacaggac
tatgttaccaggacctacccagaagactcctatcggttatccaagctgttgctgcgtctc
ccggccctgcggctgatgagtgcagcggtgacagaggagctgttcttcgctggcctcatc
ggcaacgtgcagatagacagcatcatcccgtacatcctcaagatggagtccactgactac
aacagccaggtggcccctggagtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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