KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112254104
Entry
112254104         CDS       T05605                                 
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
otw04144  Endocytosis
otw04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112254104
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112254104
  09143 Cell growth and death
   04217 Necroptosis
    112254104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112254104
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112254104
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112254104
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112254104
  Exosomal proteins of other body fluids (saliva and urine)
   112254104
  Exosomal proteins of colorectal cancer cells
   112254104
SSDB
Motif
Pfam: Snf7 SYF2
Other DBs
NCBI-GeneID: 112254104
NCBI-ProteinID: XP_024282102
Position
LG07:18615141..18634464
AA seq 223 aa
MSLLGKLFGAGGKGGKSASPQEAIQRLRDTEEMLTKKQDFLEKKIDQELITAKKNGTKNK
RAALQALKRKKRYEKQLGQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGEEFDEDDLLAELEELEQEELDKNLLE
IASTENVPLPNVPSTSLPARPAVQKKQEEDEDDMKDLEAWAAN
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtctttgttggggaagttatttggcgctggaggtaaaggtgggaaatctgctagccct
caggaggcgattcagcgacttcgagacactgaggaaatgttgacgaagaaacaggacttt
ttggagaaaaagattgaccaggaactcatcactgcgaagaagaatggcacaaaaaataaa
agagctgctctgcaggcattaaaacggaagaagcggtatgaaaagcagctgggccagatc
gatggcacgctgtccaccatcgagttccagagggaggcgctagagaacgccaacaccaac
accgaagtgctgaagaacatgggctttgctgccaaggccatgaaggcagcccatgaaaac
atggacatagacaaagtggacgacttaatgcaggacatcacagagcagcaggagctggca
caagaaatctctgacgctatttctaaacccgtagggttcggagaggaatttgatgaagat
gatctcttggcggaattggaagaactggaacaagaggaactagacaaaaacctgctagaa
atcgcaagcacagagaatgtaccgctgccaaatgtaccctctacatccttacctgcaaga
ccagcagtacagaagaagcaagaggaagacgaggatgacatgaaggatttggaggcatgg
gccgccaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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