KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112254729
Entry
112254729         CDS       T05605                                 
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X1
  KO
K15731  carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112254729
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112254729
Enzymes [BR:otw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     112254729
Protein phosphatases and associated proteins [BR:otw01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   112254729
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     112254729
SSDB
Motif
Pfam: NIF
Other DBs
NCBI-GeneID: 112254729
NCBI-ProteinID: XP_024283286
Position
LG07:complement(49667880..49699751)
AA seq 271 aa
MESSIITQVQKEDSQLPSKTGQVNQSSPKKPRSRNIFKALFCCLRAQDAPQPPPPAQDTL
LPPEDNGTIDKLDLLQNLRYQFHQVPGTSLLPEVTPQDEGKICVVIDLDETLVHSSFKPI
SNADFIVPVEIEGTTHQVYVLKRPHVDQFLQRMGELFECVLFTASLAKYADPVTDLLDQC
GVFGTRLFRESCVFHQGCYVKDLSRLGRQLNKTLILDNSPASYIFHPENAVPVVSWFDDL
EDTELLSLLPVFEELSEADDVYAKLQQLRAP
NT seq 816 nt   +upstreamnt  +downstreamnt
atggaaagttctattatcactcaagtgcagaaagaagatagtcaactgccgtccaagaca
ggccaggtgaaccaatcttccccaaagaagcctcggagccggaatatcttcaaagcgctt
ttctgttgcctccgagcacaggatgcccctcagcctccaccccctgcccaggatactcta
ctccctcctgaggacaatgggacgatcgacaagcttgatctacttcaaaaccttcgctac
cagtttcatcaagttccagggacaagtctactgcccgaggtaacccctcaggatgagggc
aagatctgtgtggtcattgacctggatgagacattggtgcacagctccttcaagcccatc
agtaatgctgacttcattgtacctgtggagattgaaggaacaacacaccaggtttatgtc
ctgaagaggccacatgtagaccagttcctccagaggatgggagagctgtttgagtgtgtt
ctcttcactgcaagtcttgcgaagtatgcagacccagtgacagacctgctggatcagtgt
ggtgtgttcgggacgcgtctctttcgggagtcctgtgtgttccaccagggctgctacgtc
aaggacctgagccgcctgggccgccagctcaacaagacccttatcctggacaactcccct
gcctcctacatcttccatcctgagaatgctgtgcctgtggtgtcctggtttgacgacctg
gaggacactgagctgctgagcctcctacccgtctttgaggagctgagtgaggcggacgac
gtctatgccaagctgcagcagctacgagccccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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