KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112256094
Entry
112256094         CDS       T05605                                 
Name
(RefSeq) HLA class II histocompatibility antigen gamma chain
  KO
K06505  CD74 antigen
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112256094
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:otw04090]
    112256094
   00535 Proteoglycans [BR:otw00535]
    112256094
CD molecules [BR:otw04090]
 Proteins
  112256094
Proteoglycans [BR:otw00535]
 Cell surface proteoglycans
  Others
   112256094
SSDB
Motif
Pfam: MHC2-interact MHCassoc_trimer
Other DBs
NCBI-GeneID: 112256094
NCBI-ProteinID: XP_024284847
Position
LG08:complement(65179342..65187533)
AA seq 215 aa
MEEQQQQRHDDALLERAGSQDVILPITTNNTRASNSHAFKVAGLTVLACLLLAGQALTAY
LVFNQRDQIHGMQKSNDNMRKQLRNRPPAVAPVKMQTPMLNMARLIDFTDEDVKTPMTNL
EATAVAIVSLEEQVKNLLQNPQLPQFNETFLANLQSLKKQVEETEWEGFETWARYWLLFQ
MAQEKPPVLPTPQPVPHQRRASYPRMMQMKEYKNE
NT seq 648 nt   +upstreamnt  +downstreamnt
atggaggagcaacagcagcagagacacgatgatgcgctcctggagcgcgcagggagccag
gacgttatcctcccaataacaaccaacaacacaagggcctctaacagccatgcttttaag
gtagcagggctcacagtgctggcgtgtcttctcctagccggccaggccctcacagcctac
ctggtcttcaaccagagggaccagatccatggcatgcagaagagcaacgacaacatgcgc
aagcagctgagaaacagaccaccggctgtggcccctgtcaagatgcagacacccatgctc
aacatggcccggctgatcgacttcaccgatgaggacgtcaagactcccatgacgaacctg
gaggccactgcagttgcaattgtgagcctggaggagcaagtgaagaatctgctgcagaac
ccccagctgccccagttcaacgagacgttccttgccaacctgcagagcctgaagaaacag
gtggaggagactgagtgggagggctttgagacctgggcgcgttattggctgctcttccag
atggcccaggagaagccccctgttctccccacacctcagccagtaccccatcagaggagg
gcatcttaccccaggatgatgcagatgaaggagtacaagaatgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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