KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112257086
Entry
112257086         CDS       T05605                                 
Name
(RefSeq) CD40 ligand-like
  KO
K03161  tumor necrosis factor ligand superfamily member 5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060  Cytokine-cytokine receptor interaction
otw04514  Cell adhesion molecules
otw04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112257086
   04514 Cell adhesion molecules
    112257086
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    112257086
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:otw04052]
    112257086
   04090 CD molecules [BR:otw04090]
    112257086
Cytokines and neuropeptides [BR:otw04052]
 Cytokines
  Tumor necrosis fators
   112257086
CD molecules [BR:otw04090]
 Proteins
  112257086
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 112257086
NCBI-ProteinID: XP_024286428
Position
LG08:complement(61452558..61456062)
AA seq 264 aa
MINMYQTNLPPPPIPPRLGSVKSAPGAGHNKPLLGFLIGMIVLQMLLLLGGFTYLYHKEN
KYDEDFEHKYLDDMIVLRRLGECEKDSQSVLDCEKLVEKYKNIMEKVSQVEGKAVKRTGG
VPSYGAMARMIVKQPVVGALPSSKYLEWNIGHSVLRNVQYFKSSWLKVLQPGDYDIYSQV
AFSKWHPKTPLASRVKLRKGETGKEKNLMTAYCSLGDQNRTDVCTAFQGGVFSLEPEDQI
SVWVTDPSLVNYEEGTTTFGLFKL
NT seq 795 nt   +upstreamnt  +downstreamnt
atgatcaacatgtaccagaccaacctgcctccaccaccgatccccccccggctaggctct
gtcaagtcagcaccaggagcgggccacaacaaacctctcctcgggttcctcattggtatg
atagtgctccaaatgctgctactactggggggattcacctacctgtaccacaaggaaaac
aagtatgacgaggactttgaacacaagtacctggatgacatgatcgtcctgaggagactt
ggggagtgtgagaaagacagccagtcagtactcgactgtgagaagcttgtggagaaatac
aaaaacataatggaaaaggtctcacaagttgaaggaaaagctgtcaaacgcactgggggt
gtgccctcgtatggagccatggcacgcatgatagtcaagcaacctgtcgttggtgcactc
ccttcatcgaagtatctggagtggaacataggccactcagtgctgaggaacgtccagtac
ttcaagtccagctggttgaaggttctgcagcctggagactacgacatttactcccaggtg
gccttctccaaatggcaccccaaaacccctctggcgagccgggtgaagctgaggaagggg
gagacaggaaaggagaagaacctgatgacagcctactgcagcctgggggaccagaaccgg
acagacgtgtgtacagccttccagggaggagtgttcagtctggagcctgaagaccagatc
tctgtgtgggtgacggaccccagcctggtcaactatgaggaggggacgaccacctttgga
ttatttaagctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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