KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112262294
Entry
112262294         CDS       T05605                                 
Symbol
foxa1
Name
(RefSeq) hepatocyte nuclear factor 3-alpha
  KO
K09387  forkhead box protein A1, hepatocyte nuclear factor 3-alpha
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112262294 (foxa1)
Transcription factors [BR:otw03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix tissue-specific regulators
    112262294 (foxa1)
SSDB
Motif
Pfam: Forkhead Forkhead_N HNF_C
Other DBs
NCBI-GeneID: 112262294
NCBI-ProteinID: XP_024293745
Position
LG11:complement(22208604..22211637)
AA seq 435 aa
MLGTVKMEGHETPDWSSYYNDAQEVYSPMVNNGMNAGLSSMNNMNSYMSMSTNGNMTSGS
FNMSYANPGLGAGLSPGTMTGMPPSASSAMNGMGGGVPLMGTALSPSNMGAMSAQQASMN
AMNPYASMSPTMSPMSYTQPNLNRARDNKSFRRSYPHAKPPYSYISLITMAIQQAPSKML
TLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVSRSPDKPGKGSYWALHPDSG
NMFENGCYLRRQKRFKCENRKISSSKGDGRKDQSGSGSPSSENTNSKTGNVDSNSLSNQS
SSPHSMDHRSSGSASELKSSGPPLHPVASSATSLSSLPLPPHSMAHESHLHLKGDPHYSF
NHPFSINNLMSSSEQQHKLDLKAYEQALQYSSYGSSMSSSLPLGSASMVGRAMDPSAIEA
SYYQGVYSRPVLNTS
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgttgggtacagtgaaaatggaaggtcacgaaacgccagattggagcagctattacaat
gacgcacaagaggtatattcgcccatggtgaacaacggcatgaatgcaggactgagttcc
atgaacaatatgaacagttacatgagtatgtctactaatggaaatatgacctcaggttct
ttcaatatgtcttacgccaaccccggcctgggagccggactaagccccgggacaatgaca
gggatgcccccgagcgcgtccagtgcgatgaacggaatgggtggaggggtaccgttaatg
ggcactgcccttagcccctcgaacatgggcgcgatgtcggctcagcaggcttccatgaac
gctatgaatccatacgcgagcatgagccctactatgagcccaatgtcctatactcagccc
aacctgaaccgagcaagggacaacaagtcgttcaggagaagctacccacacgcaaagcct
ccgtattcatacatatccctcataaccatggccattcagcaagcaccaagcaagatgctc
acgcttagcgaaatctatcagtggataatggacctattcccatactacagacagaaccaa
cagaggtggcagaactctattcgccattccttgtcttttaatgattgcttcatcaaagtg
tctaggtcaccggataagccaggcaaaggttcgtactgggccctgcacccagattcagga
aatatgttcgagaacggttgttacctacgcagacaaaagcgctttaaatgcgaaaataga
aagatatcttcaagtaaaggggacggaaggaaagaccagtccggttctggatcgccttcg
agcgagaacaccaacagcaagactgggaatgtggactccaactccctctccaaccagtcc
tccagccctcacagcatggaccacaggagcagtggcagcgcctctgaactaaagagcagc
gggccacctctccaccccgtggccagctcggccacgtccctgtcctctctccctttacct
ccgcactcgatggcgcacgagtcccatctgcacctaaaaggggatccccattactcattc
aaccacccgttttcaataaataatttaatgtcatcctcagagcaacagcacaaactggat
ttgaaagcctacgagcaagctttgcaatactcttcctacggctcaagtatgtcttccagt
ctacccctcggcagcgcgtccatggtaggcagagccatggacccatccgcaatagaggcg
tcatactatcaaggtgtgtattccagaccagtcctcaacacttcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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