KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112264770
Entry
112264770         CDS       T05605                                 
Name
(RefSeq) H-2 class I histocompatibility antigen, Q10 alpha chain isoform X1
  KO
K06751  MHC class I antigen
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144  Endocytosis
otw04145  Phagosome
otw04218  Cellular senescence
otw04514  Cell adhesion molecules
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112264770
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112264770
   04145 Phagosome
    112264770
  09143 Cell growth and death
   04218 Cellular senescence
    112264770
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112264770
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112264770
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:otw00537]
    112264770
Exosome [BR:otw04147]
 Exosomal proteins
  Proteins found in most exosomes
   112264770
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:otw00537]
 Antigens
  112264770
SSDB
Motif
Pfam: MHC_I C1-set Ig_3
Other DBs
NCBI-GeneID: 112264770
NCBI-ProteinID: XP_042151504
Position
LG13:complement(34646207..34654006)
AA seq 467 aa
MCAFKMSVFVLLFLFATLSTVDSVGKWSLNYIYTALSKPVELPGIHEFTAMGLMNDKQID
YYDSVSKKKIPKQDWMREKLPADYWDKGTQSRKSKEQWFKVNVNILMDRMRHNNTDVHIL
QWTHGCEIDQQSDGTLKFIKGTDQYSYDGEDFLAFDDANMQWVAPVVQAQPTKRKWDGVQ
ILNQYTKGYLEKECVDWLSKFMAYEDKEVSRADSPKVYAFAKKAKTAGNVRLTCMATGFY
PKDVIMQMKKNGVPLTERDGVQSTGVLPNDDATYQIRMSVQIPEADKETYECSVNHVALK
EPVVVKWDGKCCDCTRVTGVIIRAVVVVVLLLTVVPCCSMLVLWKKGKIFAGKKGDLPAT
GIQAPLNGNGNGAAVLNMPGTKDDTSSTDSGQGSIERLEREAMLPNGGTKDDTSSTDSGQ
GSIERLEREAMLPNGGTKDDTSSTDSGQGSIERLEKEAMLPNGAIEE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtgtgcgttcaaaatgtctgtcttcgtacttttgttccttttcgcgacactttcgacg
gtggacagcgtggggaaatggtcgctgaattacatctacactgctctgtcaaagccagta
gaattgcctggtatccatgagttcactgccatgggtctgatgaatgacaaacagattgat
tactatgacagtgtgtcaaagaagaagattcccaaacaggactggatgagggagaagctg
ccagcagactactgggataaaggcactcagtcacgcaagagcaaggagcagtggttcaaa
gtcaacgtcaacatcctgatggatcgcatgaggcacaacaacactgatgtccatattctt
cagtggacacatggctgtgagattgaccaacagagtgacggcacattgaaattcataaag
ggcacagaccagtacagctacgatggtgaagacttcctggcctttgatgatgccaatatg
cagtgggtggccccagttgttcaagctcagccgactaagaggaagtgggacggggtccag
atcctcaaccagtacaccaagggctacctggagaaggagtgtgtggactggctttccaaa
ttcatggcatacgaggacaaagaagtcagtagggctgattccccaaaggtctatgcgttt
gctaaaaaggccaaaactgccggaaatgtccgactgacctgcatggccacaggtttctat
cccaaagatgtgattatgcaaatgaagaagaatggtgttccattgaccgaacgtgatgga
gtgcagtctacaggagtcctacccaatgatgatgccacctaccagatcaggatgagtgtg
cagatcccagaggcagataaggaaacttatgaatgctctgtcaaccatgtagctttgaag
gagccagttgtggtaaaatgggatgggaaatgctgcgattgtacccgagtaacaggtgtt
atcattcgtgctgttgttgtggtggtcctcctgctgaccgtggttccatgttgctccatg
ttggttctttggaagaaaggcaaaatatttgctggtaaaaaaggagatctaccagctact
gggatccaggcacctctaaatggcaatggaaatggagcagccgttttgaacatgcctggg
acaaaggatgacactagcagcactgactctggtcaaggcagcatcgaacgtctagagagg
gaggcaatgctgcctaatggtgggacaaaggatgacactagcagcactgactctggtcaa
ggcagcatcgaacgtctagagagggaggcaatgctgcctaatggtgggacaaaggatgac
actagcagcactgactctggtcaaggcagcatcgaacgtctagagaaggaggcaatgctg
cctaatggagccattgaggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (16)   
   RefSeq(pep) (16)   
DNA sequence (16)   
   RefSeq(nuc) (16)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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