KEGG   Oligella urethralis: CEQ07_04935
Entry
CEQ07_04935       CDS       T05343                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
our  Oligella urethralis
Pathway
our03410  Base excision repair
our03430  Mismatch repair
our03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:our00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CEQ07_04935 (recJ)
   03430 Mismatch repair
    CEQ07_04935 (recJ)
   03440 Homologous recombination
    CEQ07_04935 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:our03400]
    CEQ07_04935 (recJ)
DNA repair and recombination proteins [BR:our03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CEQ07_04935 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CEQ07_04935 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CEQ07_04935 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Med17 DUF4254
Other DBs
NCBI-ProteinID: AVL70818
Position
complement(1052200..1053930)
AA seq 576 aa
MVASVIIKERQSSTAHSQALEASGLHPLLARLYAARGVQSASQTDYRWNQLIHPQQLSQN
QKAAQLIADAIEQNKRLLIVADYDCDGATACAVAICGLKAMGATVDFMVPNRFETGYGLS
REVIDLILARYDELPDMIITVDNGIASVDGVNYAQAQGIDVIVTDHHLPGDELPAALAIV
NPNQADCHFPSKNLAGVGVMYYLLMALRAELKQRGHFDATNQPRLDSLADLVALGTVADV
VKLDANNRILVSQGLERMRRGLMRPGIRALFEVSGTSYHQASASDLGFRIGPRINAAGRL
ADMSIGIRCLITEDEAEAMQLAQALDKINQERRHMEQEMNEQALESLAQEEEQNATPLAS
IAVYKEDWHQGVVGIVASRLKEKFWRPVIAFAPADNGELRGSGRSIPEIHLRDVLDLVSK
RHPEMILKFGGHAMAAGLSIRQEDFEAFKLALHEAIITMSGKSSFASVIETDGPLATEHA
SSRVATLLDQQVWGAGFPPPCFNDVFIVRSQRILKDKHLKLRLEKDQVLYDAIWFNHTEL
LPEMARVVYELKANEWNGQVNVQLLIQHAEAYTAVQ
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggtggcatcagtcataatcaaagagcgtcaaagctcaacagcacatagtcaagcactt
gaggcgagcggcctacaccccctactcgcccgtttatatgcagcgcgcggtgtacaatcc
gcaagccaaaccgactaccgttggaatcaattaatccatccccagcaactgagccaaaac
caaaaagcggcacagttgattgctgatgccattgaacaaaataagcgcctcttgattgtc
gctgattacgattgtgacggtgccactgcctgcgcagtagcaatctgtgggcttaaagct
atgggcgctactgtcgacttcatggtacccaatcgctttgagacgggttatggtctatca
cgtgaagtcattgatctgattttggcacgttacgatgagctacctgacatgattattacc
gtggacaatggcattgccagtgtcgatggagtgaattatgcccaagcacaaggcattgat
gtgattgtgacggatcaccacctacccggggatgaattgcccgctgccttagccattgtt
aatcctaaccaagcggattgccattttccatcaaaaaacctggccggcgtgggggtgatg
tactacttactcatggcgttgcgggccgaattaaagcagcgtggtcattttgatgcaact
aatcagccccgtttagacagcttagcggatttagtggcactcggtacagtggctgacgtg
gtcaagctagatgcaaataatcgtattctagtaagccaaggtcttgaacgcatgcgcaga
ggactgatgcgccccggcatacgagccctgtttgaggtatctggtaccagttatcatcaa
gccagtgccagtgatttaggctttagaatcggtcctcgaattaatgccgctggacgtcta
gccgatatgagcattggtattcgttgcttaatcaccgaagatgaagcagaagcgatgcaa
ctagctcaggcactcgataaaatcaaccaagagcgtcgccatatggaacaggaaatgaat
gagcaggccttggaatcattagcccaagaagaggagcaaaatgctacccccttagcctcc
attgctgtttataaggaggattggcatcagggtgtggttggcatcgttgcctcacgcctt
aaagaaaagttttggcgcccggtaatcgcctttgcaccagccgataatggtgagctgcgt
ggctctggacgctctattccagagatacacctaagagatgtattagatttggtttctaaa
cgtcatcctgagatgattttaaaatttggtggtcatgccatggcagccggtttaagtatt
cgccaagaagactttgaggcttttaagctcgccttacacgaagccattatcacgatgagc
ggtaaaagcagctttgcctctgtgattgaaaccgatggtccgcttgctactgaacatgcg
agcagccgagtggccactttactagatcaacaagtatggggtgccggttttccgccgccc
tgctttaatgatgtatttatcgtgcgttcccaacgcatcctcaaagataagcatttaaag
ctacgactggaaaaagatcaggtgctatatgacgccatttggtttaatcatacagaacta
ctaccagagatggcacgtgtggtttatgagctgaaagcaaatgaatggaatgggcaagtc
aatgtacaattgctgatacaacatgcagaagcttacacagcggttcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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