KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_06548
Entry
T265_06548        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013  Nucleocytoplasmic transport
ovi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    T265_06548
   03015 mRNA surveillance pathway
    T265_06548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovi03019]
    T265_06548
   03036 Chromosome and associated proteins [BR:ovi03036]
    T265_06548
Messenger RNA biogenesis [BR:ovi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     T265_06548
Chromosome and associated proteins [BR:ovi03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     T265_06548
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 20320727
NCBI-ProteinID: XP_009170108
UniProt: A0A074ZFS7
Position
Unknown
AA seq 234 aa
MTAAIDDGAVNREKTCPLLLRMFYSSVKHNNALEYSRGRTPNNELQVYTWLDATLRELAS
LVKQVNPESRKRGTTFDFALVTPDSRSPVYRMREIGVVCAGSPSDTDRIMLRDCQFIIGD
MIDVAITPAPAPAVEQPTYYSAAANPIDVGGRVPRRNSPYSRGRRDGFSRPIDRGGRFER
SGLDDTRRTVIDTTARERRDDYRPGGSRRRERSGSDRRPHETSTSRTNRRVVPY
NT seq 705 nt   +upstreamnt  +downstreamnt
atgacagccgccatagatgatggggcagtaaatcgggaaaaaacttgtccgctcctcctt
agaatgttctacagttccgtgaaacacaataatgccttggaatattcacgtggccgcacc
ccgaacaatgaacttcaagtttatacctggttggacgccacattacgcgaattagcttcc
ctggtgaaacaggtcaatccggaatcacgcaaacgtggcaccaccttcgattttgccctc
gtcactccggacagtcgttctcccgtctatcggatgcgcgaaatcggtgtggtgtgtgcc
gggtctccatcggacactgatcgcatcatgctacgggactgtcagttcatcatcggcgat
atgattgacgtcgctattactcctgctccagcacctgcagtggaacaaccaacgtattac
tcggccgccgcaaaccccattgatgtcggtggccgtgtgccacgtcggaactcaccatac
tctcgtggacgtcgtgatggcttctctcgcccgattgatagaggagggcggtttgagagg
tctggtttggatgacactcgcaggactgttatcgacaccactgcacgagaacggcgagat
gactaccgtcctggaggcagcagacgtcgtgagcgatcgggcagtgataggcgcccgcat
gaaacatcgacaagtcggacaaatcgtcgagttgtcccatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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