KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_10881
Entry
T265_10881        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03030  DNA replication
ovi03410  Base excision repair
ovi03420  Nucleotide excision repair
ovi03430  Mismatch repair
ovi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    T265_10881
   03410 Base excision repair
    T265_10881
   03420 Nucleotide excision repair
    T265_10881
   03430 Mismatch repair
    T265_10881
   03440 Homologous recombination
    T265_10881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ovi03032]
    T265_10881
   03400 DNA repair and recombination proteins [BR:ovi03400]
    T265_10881
Enzymes [BR:ovi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     T265_10881
DNA replication proteins [BR:ovi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    T265_10881
DNA repair and recombination proteins [BR:ovi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      T265_10881
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     T265_10881
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2 DNA_pol_B_exo2 divDNApol
Other DBs
NCBI-GeneID: 20325049
NCBI-ProteinID: XP_009175643
UniProt: A0A074ZBK1
Position
Unknown
AA seq 1128 aa
MATPKRPYAMVKQSSSSVKRGRGEDHPEPSKFEQELMLLDELEAEDVALVDESATLAVVD
ASPSSLWSRPIPPSMDPDRDSIIFQQFDVSHYKGDRLAGMPGAGESPVPIVRLFGITQKG
NSVCAHVHGFVPYFYVPAPKDFSVSHLGTFREALNTALLKDARTKEFDGLKHLVLMVDCE
QKQNIYGYHGKRKLPFLKVTVALPRIISAAKRILENGFAFGEYPFQSYPAFEANIDFEIR
FMVDTEITGCCWVEAPPGSYRLRDSSDVNDQKVWGNSSAQKSHSNVAPAQSRCQIEFDIA
WDALIAHQPDGEWSSIAPLRILSVDIECAGRKGIFPVPDQDPVIQIATMVCNYGESTPFI
RNVFTLDTCAPIVGSQVVCHKTEKELLEHWAMFVRQVDPDIITGYNTQNFDLPYLINRAN
HLKVDSFAFLGRVRGARSTVRDVMTQSKQMGRRENKFTNIEGRVQLDLLQILFRDYKLRS
YTLNAVSYHFLEEQKEDVEHNVISDLQNGDAHTRRRLAVYCLKDAYLPLRLLDKLMCVVN
NIEMARVTGVPLTYLITRGQQVKVISQLLRKAREHDFVLPTYQSQQGDEYVGATVLEPIK
GFYNEPIATLDFASLYPSIMMAYNLCYTTLMQVSSTPGGAAAGLNAFVERYNLSPDDYIC
TPTGAYFVKSSVHRGLLPEILEQLLSARKKAKVDLAKETDPLRKRVLDGRQLALKISANS
VYGFTGAQVGKLPCLEISASVTSFGRRMIDQTKEHVEGKFTRANGYAHNAAVIYGDTDSV
MCKFGVSTVAEAMELGRKAAEIISAEFPNPIRLEFEKVYFPYLLINKKRYAGLYFTKPDK
HDKMDCKGIETVRRDNSPLVANLIQACLERILIHRDPNSAITFAQGVISDLLCNRIDISQ
LVISKELTKTDEEYAGKQAHVELAAKMRKRDAGSAPHLGDRVPYVITAVGGKNSATYTKA
EDPLYVLEHNVPIDTKYYLENQLANPLLRIFEPILGEAKAKSVLLNGEHTRVKAVVHSKV
GQLSAFTQKRATCVGCRTLLPNDKAEAALCKYCEPRASEIYQKEIAQLNVMEGRFARLWT
ECQRCQGSIHEEVICTSRDCPIFYMRMKSRKDTEEQYKVVKRFGDPVW
NT seq 3387 nt   +upstreamnt  +downstreamnt
atggccactcctaaaagaccgtacgcaatggtgaagcagagttccagttctgtgaagcga
ggcaggggcgaggaccacccggaaccatcgaaatttgagcaagaactaatgttgttggat
gagttggaggcagaggatgtggcattggtagatgagagtgcaacactggctgtcgtcgat
gcgtctcccagttctctttggtcaaggcctatcccgccatcaatggaccccgatcgtgat
agtattatctttcagcaattcgatgtgtctcattacaagggtgaccgactggcgggaatg
cccggtgcaggcgagagccctgttccgatcgtccgcttatttggtatcacacaaaaggga
aacagtgtatgcgcccatgttcacggatttgtcccctatttttacgtgcccgcacccaaa
gatttctccgtttcacacttgggcacttttcgggaagcattaaatactgctctactaaaa
gatgcgcgaacaaaggagttcgatggcctcaaacatctggtcctgatggtcgattgtgaa
caaaaacaaaatatatacggctatcatggcaagcgcaagctgccatttctcaaagtgaca
gtcgctctacctcgcatcataagcgctgccaaacgaatactggagaatggatttgctttc
ggagaatacccctttcagtcttatccagcttttgaggcaaatattgatttcgaaatccgt
tttatggtcgacaccgagatcaccggttgctgttgggtggaagctccacccggaagctat
cgtcttcgggattcatcagatgtcaacgatcagaaggtgtggggaaatagttcagcccaa
aaatctcactccaatgttgcaccagctcagtcccgatgtcagattgaatttgacatagct
tgggatgcacttatcgctcatcaacctgatggtgagtggagttcaatcgctcctctgcgg
atcctcagcgtggacattgagtgcgccggacggaaaggtatatttcctgtacctgatcaa
gatcccgtcattcaaatcgctacgatggtgtgcaactacggggagagtacgccgtttatt
cgaaatgtgttcacactagacacgtgcgctccgattgtgggttcgcaggttgtgtgccac
aaaacggaaaaggagttactcgagcattgggccatgttcgtgcgacaagttgatccagat
atcatcactggttataacacgcagaattttgacttaccatacttgatcaatcgagcaaat
catctgaaagtggacagcttcgctttcctcggccgtgttcgcggcgccagatccaccgtg
cgcgacgtgatgacacagtcgaaacaaatggggagacgagagaacaaattcaccaatatc
gaggggcgcgttcagctggatttgcttcagattttgttccgcgactataaacttcgcagt
tacacgttgaacgcagtcagttaccattttctggaggaacaaaaagaggatgtagagcac
aatgtaatttcagaccttcaaaacggggatgcccatacacgccgtcggctggctgtctac
tgcctaaaagatgcctacctgccattgcgactgttggacaaattgatgtgcgtggtgaat
aacattgaaatggcacgtgtgactggggttccgttgacctatttgatcacccgaggacaa
caggtcaaggtcatttcacagcttctacgcaaagctcgggagcatgactttgttttaccg
acgtaccagtcacaacagggtgacgaatacgttggggccactgtattggagcccatcaaa
ggattttacaacgaaccaattgccacgctcgacttcgctagtctgtatcccagtatcatg
atggcctacaatctgtgctatactacccttatgcaagtgagtagtacacccggcggagca
gcagctggattgaatgcttttgtcgaacgatacaacctttctccggacgactacatctgc
acaccaacgggggcatattttgtcaagtcttctgtccatcgtggcctgctgcctgagata
ttagaacagttgctcagcgctcgtaaaaaggcgaaggttgaccttgccaaggaaactgac
ccactacgtaagcgcgtgttggatggtcgtcagctggctttgaaaatcagtgcaaattct
gtctacggctttactggggctcaggttggtaaactcccctgcctggaaatttcagcctca
gttacctccttcggcagacgaatgatcgatcaaaccaaggaacatgttgaaggaaaattc
accagggctaatggttatgcccataacgctgctgtaatttacggtgacacagactctgtg
atgtgcaaatttggtgtctccaccgtagctgaagctatggaattgggtcgcaaagctgct
gaaatcatctctgcggaatttccaaatcctattaggctcgaattcgaaaaggtttatttc
ccgtacttgttgatcaacaagaagcgatatgctggtctctatttcaccaaaccagacaaa
cacgataagatggactgtaaaggaatcgaaacagttcgacgggacaatagtcctcttgtg
gccaatctgattcaagcgtgcttggagcgaatacttatccaccgtgatccgaattccgca
atcacctttgctcagggtgttatttccgatttgttgtgcaaccgaatcgacatctcccaa
ttggttataagcaaagaacttactaaaacagacgaagagtatgcgggtaagcaggcccac
gtagagttggcagcgaaaatgcgcaaacgggatgctggctccgcaccccatctgggcgat
cgtgtcccgtatgtgattactgcagttggaggtaaaaattcagccacctatacgaaggct
gaagatcccctatatgtcttggagcacaacgttcccatcgataccaaatactacctggaa
aaccagttggccaatcccctcttgcgtatttttgaacctattttgggagaagccaaagcc
aaatctgtgctgctaaatggtgagcatacgcgcgtgaaagcggtggttcactcgaaggtt
gggcagctgtctgcgttcacacagaagcgcgctacttgtgtaggttgccgcacattacta
ccaaatgacaaggctgaagctgccctctgtaaatactgcgagcctcgtgcttcggaaatc
taccaaaaggaaatagcacaactgaatgtgatggaaggtcgttttgcacgtttgtggacg
gaatgccagcgatgccaaggcagtattcatgaagaggtcatttgtaccagccgggattgc
cctatattctacatgcgtatgaagtcgcgaaaagacacagaagaacagtacaaggttgtc
aaacgattcggggaccctgtttggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system