KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_14212
Entry
T265_14212        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    T265_14212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ovi03041]
    T265_14212
Spliceosome [BR:ovi03041]
 Complex C
  Other components
   Step II factors
    T265_14212
SSDB
Motif
Pfam: OB_NTP_bind HA2_C TPR_11 TPR_1 TPR_19 TPR_2 Helicase_C TPR_8 S1 TPR_17 TPR_14 TPR_16 DEAD TPR_12 TPR_7 TPR_10 AAA_22 AAA_19 HA2_N nSTAND3 NatA_aux_su T2SSE AAA_30 DUF3896
Other DBs
NCBI-GeneID: 20328378
NCBI-ProteinID: XP_009170861
UniProt: A0A074ZDY7
Position
Unknown
AA seq 1618 aa
MLERRSILRLSDTASEFALFGGHFTITCLVGHHFEVLGLAELAHREYQAGEYERAEQHCM
QLWNQDPENTSTLLLLSSIHFQCRRMERSAYFSQLAIKQNPLMAEAYSNLGNVFKERGQL
KEAIDNYRHALSIKPDFIDGYINLAAALVAAGDMESAVNAYATALQYNPDLYCVRSDLGN
LLKALGRLDEAKILERDGSIQKAEPMIRLVSEDRPLDARKLGYSGSGVEVRNRLPLGTNS
VDPKLMAKPIVVITPCAPESRPTKSAASPDSSFHSTTTDLSLTKGSDDLEEVVRSTISHD
ELPAFISEASAGIEKLEDDAFRRLEYFSLVSKVCTELTNHLGLDDKSLAEFVIHLARKNQ
TFDKFKAALVKKGAEFTDPLIASILRLVQKMLPQKTSKQKKDKKKAATASMGAESTEPGE
RMVDEKLELRKRLLPALCIPNEDPNQMHFKHDGFEQCTTVSADQSDTSSSSFIHPDDEHL
LKEPETYAQRERNDVDELAASDMLKDLEQLLSGAKAESLAPRKKARSPRRRGSRSPDNRG
ASSSRRPTLPVEPVVGTIYTGRVTNILAFGAVVQLEGLRKRWEGLVHISQIRQEGRVANV
SDVVQRMQKVYVKVLSFTGTRTSLSMKEVNQETGEDLNPRGRGKSPSGHQTDPAKGKMRN
VDEVDIDGARNPDRPDAGLSASTLLFRPRKDVMEEDLDSGPKRKVQRISSPERWELKQMM
SAGVIEKTELPDFDEETGLLPREDEESDEDMEIELVEEEPPFLKGHGRHAMDLSPVRIVK
NPDGSLQQAAMMRQALQKERREMKQQERQSQMMAEREAAPERMGKDWHDPMGASLDAKPQ
FGGPRSSEQFKDVPEWKRAVQGGTRTGAVGKKIVRSILEQRQSLPIFKLKDELLHAVNDN
KVLIVIGETGSGKTTQITQYLAEAGFTNTGRIGCTQPRRVAAMSVAKRVSEEFGCRLGQE
VGYTIRFEDCTAPETKIKYMTDGMLLRECLIDPDLRQYSVIMLDEAHERTIHTDVLFGLL
KKAIQKRDDMKLIVTSATLDSVKFSQYFFEAASIHVNNFRTKLPGLVALREPIFIAPAAS
QEGHLPFYRLIFLLLQPIFTIPGRTYPVEILYSLEPENDYLDAALNTVMQIHLTEPPGDI
LVFLTGQEEIDSGCEILYERMKALGSDVPELIILPVYAALPSEMQSRIFDPAPPGSRKVV
IATNIAETSLTIDGIYYVIDPGFVKQKVYSSKSGMDQLIVTPISQAQAKQRAGRAGRTGP
GKCYRLYTERAYRDEMLATNVPEIQRTNLASTVLQLKAMGINDLLSFDFMDPPPLQTLVA
AMETLHGLSALDDEGLLTRLGRRVCLVDPRTSLSFVIAIVFRQPECFASFQMAEFPLEPM
LSKMLIMSVHLQCSEEVLTIVSMLSVQNVFYRPKEKTELADQRKAKFHQPEGDHLTLLAV
YNAWKNNKFSAPWCYDNFIQARTLKRAQDVRKQLLGIMDRHKLDVVSCGKKTALAQKAIL
SGFFRNAAKKDPQEGYRTLVDQQVVYIHPSSALFNRQPDWVVYHELVMTTKEYMREVTTI
DPRWLVEFAPNFFKFGDPTKLSRAKKSMRIEPLYSKFEEKDSWRISRAPRKFHVKVTF
NT seq 4857 nt   +upstreamnt  +downstreamnt
atgttggagcgtcgttctatcctccgtttgagcgatacggccagtgagttcgcattattt
ggtggtcattttaccataacatgtcttgtgggccaccattttgaagtgcttggtctcgct
gagcttgcccaccgtgagtatcaagccggggaatatgagagagctgagcagcattgtatg
cagctgtggaatcaagacccggagaatacttccactttgttactgcttagttcgatccac
ttccagtgtcgtaggatggagagatcggcatatttcagtcaattggcaatcaaacagaat
ccgcttatggcggaagcgtactctaacctcgggaatgtcttcaaagaacgtgggcaactg
aaggaagcgattgataactaccggcatgctctaagtatcaagccagatttcatcgatgga
tatatcaatctggcggccgctctagttgctgccggcgacatggagtctgcagtcaacgca
tatgccaccgccttgcagtacaatcctgatctatactgcgtcagaagtgacctcggaaac
ttgctgaaagcactggggcgtttggacgaagcgaaaatcttggagcgggatggcagcatt
caaaaggccgaaccaatgatcaggcttgtatctgaggatcgcccgttagatgcgcgaaag
cttggttacagcggatcaggggtagaggtacgaaacaggcttccactgggcacaaattca
gtcgaccccaaactcatggccaagccgattgtggtcataaccccttgtgctccagaaagc
aggccgacgaaatcagccgcgtctccggacagcagttttcattcaaccaccacagacctc
tcactcaccaaaggcagtgatgatttggaggaggtagttcggagtacaatatcacacgac
gaactaccagctttcatctcagaagcttctgcggggatcgagaagcttgaagacgatgcc
tttcgtcgtctggagtatttctcgcttgtttcgaaagtgtgcacggagctgactaatcat
ttgggtctggatgacaaaagtcttgccgaattcgttatccatttggcgcgaaagaaccag
actttcgacaaatttaaggcggccctggtgaagaaaggtgcggagttcactgatccacta
atcgcaagcattttacgccttgtgcaaaaaatgttacctcagaaaacatcgaaacagaag
aaagataagaagaaggcagcaacagcttctatgggtgcggaatcgacagaacccggggag
cgaatggtggatgaaaagttggagttgaggaaaaggttgttgccagcgctttgtatacca
aatgaggatccgaatcagatgcatttcaaacacgatgggtttgaacaatgtaccactgta
tcggccgatcagtcagacaccagcagttcgagtttcattcatccagatgatgagcacttg
ctcaaagagcccgaaacatatgcccaaagagaacgcaatgatgttgatgaactggctgct
tctgatatgctcaaggatctggaacaactgctgagtggtgccaaggcagaatctctggct
cctcgcaagaaagctaggagtccccgtaggcgtggtagtcgctctccggataaccgaggt
gcatcatcatcaagacgcccgaccttgcccgttgaaccagttgttggtacaatctacaca
ggacgtgtgacaaacatattggcctttggtgctgtcgtgcagctggagggtttgagaaag
cggtgggaaggattggtacatatctcccagataagacaagagggtcgcgtagccaacgtg
agcgatgtagtacagcgaatgcagaaggtctatgtcaaagtgctctctttcacgggtacg
aggaccagtttgagcatgaaggaagtaaatcaagaaactggagaagatttgaatccacgt
ggacgtggcaagtcaccatccggccaccagacagacccagcgaaaggcaaaatgcgcaac
gtagacgaagtcgatatagatggagcgaggaatccagatcgtccggatgccggcctgtcc
gcctcgactttactatttcggccgaggaaagatgtgatggaagaggacttggactctggc
cctaaacgaaaagtgcaacgaatcagtagtcctgagcgctgggaattgaaacagatgatg
tccgctggggtgattgaaaaaacagagcttccggatttcgacgaggaaaccggactttta
ccccgagaggatgaggagtccgatgaggatatggagattgaactggtcgaggaagaaccg
ccgttcttaaagggccatgggcggcatgcgatggatctgtctccggttcggattgtcaaa
aacccggacggttcgctgcagcaagcggccatgatgcgtcaggcgttgcagaaggagcgt
cgagaaatgaagcagcaagaacgtcagagtcaaatgatggccgaacgcgaagcagcaccg
gagcgcatgggcaaggactggcatgacccgatgggagcaagcttggatgcaaaaccccag
tttggcggtcctcgttcctcggaacagttcaaagacgttccagagtggaaacgcgccgta
cagggcggtactcggacgggtgcggttggcaagaaaatagttcgctccatactggagcag
cgacagtctctgcccatattcaaactgaaagatgaacttttacacgccgtcaacgataat
aaagttctcattgtgattggtgaaacgggcagcggaaaaacaactcagatcacccagtat
ttggccgaggccggtttcactaatactggccgaatcggatgtacacaaccacgtcgtgtt
gctgcaatgtccgttgccaagagagtttccgaagagtttggatgtcgacttggtcaagaa
gtgggttacaccattcggttcgaggactgcaccgctccggagaccaagataaagtacatg
acagatggtatgcttttgcgtgaatgtcttatcgacccggacctgcgtcagtactcggta
atcatgttggatgaggcacacgagcgcaccatccatacggatgtgttgtttggattgttg
aagaaggcgattcagaaacgggacgatatgaaactgattgtcacatcggctacgctggac
tcagtcaaattctcacagtactttttcgaagcagccagtatccacgttaacaactttcgc
acaaaactaccgggcttagtcgccctacgtgagcctattttcattgcacccgccgcctcc
caagaaggtcatttaccattctatcgacttatcttcctacttcttcagcctatattcacc
atccctggacgcacttatcctgtagagattctgtacagtctggagccggaaaatgactac
ctggatgctgctctaaatacggtgatgcaaattcacctgacagagccgccaggcgatatt
ctcgtcttcctcactggtcaagaggaaattgactcgggctgcgagattctctacgaacga
atgaaagcactcggttccgatgtccccgaactcattattctcccggtatatgccgctctg
ccttccgaaatgcaatcacggatcttcgatccggctccgccagggtcgcgtaaagtggtg
attgcaaccaacattgccgaaacctccttgacgatcgacggtatctactatgtgatcgac
cctggctttgtcaaacagaaggtatacagcagcaagtcaggcatggatcaattgattgtc
acccctatctcacaggctcaggccaaacaacgagctgggagagccggacgcacgggtccc
ggcaagtgctacaggctgtacacggaacgagcctatcgagacgagatgcttgccaccaat
gtgcccgagattcaacgcacaaatttggccagtaccgttctacagctcaaggccatgggg
attaacgatctattgtcgttcgatttcatggatcctcctcccttacagactcttgttgct
gctatggaaacgttacacggcttgtcagcactggatgatgaaggtcttttgacgcggttg
ggtcgacgggtatgtttggttgatcctcgtacttctctgtcttttgtcattgccattgtc
tttcgtcaacctgaatgcttcgcctcatttcagatggctgagttcccgttggagccaatg
ttatccaaaatgctcatcatgtccgtgcatctgcagtgctctgaagaggttttgaccatt
gtgtcgatgctgtccgttcagaatgtgttctaccggccaaaggaaaagactgaattggct
gatcaacgtaaagcgaaattccaccaacccgaaggcgaccacttgactctgttggctgtg
tataacgcgtggaaaaacaacaaattctctgccccctggtgttacgacaactttatacag
gcgcgaacgctcaaacgagcacaagatgttcgcaaacagcttcttggcataatggaccgg
cacaaacttgacgtggtctcttgtgggaagaaaactgcgctagctcagaaggcgatctta
tccggtttcttccgtaatgctgcaaaaaaggatccacaggaaggctatcgcacactggtc
gatcaacaggtcgtctacatccatccttcgtcagctctgttcaacagacagccagactgg
gttgtctatcacgaacttgtgatgactacgaaagaatatatgcgtgaggtgactacaatc
gatccccgttggctcgtggaattcgccccgaattttttcaaattcggcgatccgacaaaa
ctatctcgggcaaagaaatcgatgcgtatcgaacctctctacagcaaattcgaagagaag
gattcatggcgaatctctcgcgctccgagaaagttccacgtcaaggtcacattttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (74)   

Download RDF
DBGET integrated database retrieval system