KEGG   Pyrococcus abyssi: PAB0719
Entry
PAB0719           CDS       T00024                                 
Name
(GenBank) RNA methyltransferase, putative
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
pab  Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:pab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pab03016]
    PAB0719
Enzymes [BR:pab01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     PAB0719
Transfer RNA biogenesis [BR:pab03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    PAB0719
SSDB
Motif
Pfam: PabTrmU54_TRAM_dom tRNA_U5-meth_tr MTS PrmA Met_10 Methyltransf_25 Methyltransf_31 TehB Methyltransf_23 Cons_hypoth95 Methyltransf_15 Methyltransf_16 Methyltransf_11 N6_N4_Mtase Ribosomal_S13 ADH_zinc_N
Other DBs
NCBI-ProteinID: CAB49989
UniProt: Q9UZR7
Structure
Position
1034814..1036031
AA seq 405 aa
MRGVIRKLNDDGFGVLKGILVPFSAPGDEIIVERVERVKKRRVASQWKLVRSSPLRVGPR
CKAFGKCGGCTLQHLNYDYQLEFKRKKLKRILGFEVEVVPSPKIFGHRNRIDLAITKDGI
GFRERGKWWKIVDIDECPVFGKTSREAIERLKEFIEEEKISVWNIKKDEGFLRYMVLREG
KFTEEVMVNFVTKEGNLPDPTNYFDFDSIYWSVNRSKSDVSYGDIERFWGKEFIRERLDD
VDYLIHPNSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDS
NEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAGLHPRLVKRLNREKPG
VIVYVSCNPETFARDVKMLDYRIDEIVALDMFPHTPHVELVAKLV
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgaggggagtcataagaaagcttaacgatgatggctttggggtattaaaaggtattctc
gttcctttttcagctcctggagatgaaataatagttgagagagtcgaaagggtaaagaag
agaagggttgcgtcccagtggaagcttgttaggtcttctccattgagggtcggtcccagg
tgcaaggcctttggaaagtgtggcggttgcacacttcaacaccttaattacgattaccaa
ctcgagttcaagaggaaaaagctcaagagaatcctgggattcgaggttgaagttgtcccc
tctcctaagatatttggacacaggaacaggattgacttagcaataacgaaggatgggata
ggattcagggagagagggaagtggtggaagatagttgacatagacgaatgcccggtcttc
ggtaaaacctcaagggaggccatagaaagactaaaggagttcatagaggaggagaaaatc
agcgtatggaacattaagaaggatgagggattccttaggtacatggttctaagggaaggg
aagttcaccgaggaagttatggtaaacttcgtgactaaggaagggaacttaccagaccca
actaattactttgacttcgattcgatttactggagcgttaatagaagcaagagcgatgta
tcttatggcgacatcgagaggttctggggaaaggagttcataagggagaggcttgatgac
gttgattacctaatacacccaaactctttcttccaaactaacagctaccaagctgtgaac
cttgtaagaaaggttagcgagctagttgagggtgaaaaaatattggacatgtactcggga
gtgggaaccttcggtatatacctagcgaagagggggttcaatgttaagggcttcgactcg
aacgagttcgctatagagatggctagaagaaatgtcgagataaacaacgttgatgcagag
ttcgaggtagcttcagatagggaagttagcgttaagggtttcgataccgttatagttgat
cctcctagggctgggcttcatccgaggctggtaaagaggttaaacagggaaaagccaggg
gtaatagtttacgtgtcctgtaaccctgagactttcgccagggacgttaagatgcttgat
tataggattgatgaaatagttgcccttgacatgttccctcatactccacacgttgagctc
gttgcgaagctagtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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