KEGG   Salipiger abyssi: Ga0080574_TMP3071
Entry
Ga0080574_TMP3071 CDS       T04681                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
paby  Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:paby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paby03009]
    Ga0080574_TMP3071
Enzymes [BR:paby01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     Ga0080574_TMP3071
Ribosome biogenesis [BR:paby03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Ga0080574_TMP3071
SSDB
Motif
Pfam: PseudoU_synth_2 DUF5818
Other DBs
NCBI-ProteinID: APZ53405
UniProt: A0A1P8UVJ4
Position
2478345..2478884
AA seq 179 aa
MLILFNKPFGVLSQFTDKGTADSPRATLSDYIDVPKVYPAGRLDRDSEGLLLLTDDGRLQ
ARIAHPKFKKPKTYLVQVEGDPQEAQLAQLRVGVTLKDGPTRPAKVRRLPAPDLWPRVPP
VRFRKTVPDAWLEVTITEGRNRQVRRMVAHVGLPCLRLVRWSVGDWTVAGLAPGEWRAL
NT seq 540 nt   +upstreamnt  +downstreamnt
atgctgattctcttcaacaagccctttggcgtgctgtcgcagttcaccgacaagggcacc
gccgacagcccgcgtgccacgctgtcggattatatcgacgtgccgaaggtctatcccgcc
ggacggctcgaccgcgacagcgaggggcttttgctgctcaccgatgatgggcgcttgcag
gcccgcatcgcgcatccgaaattcaagaagcccaagacctatctggtgcaggtcgagggc
gaccctcaggaggcgcagctcgcgcagctccgcgtcggcgtgacgctgaaggacgggccg
acccggcccgccaaggtgcgccgcctgcccgcgcccgatctctggccgcgcgtgccgccg
gtgcggttccgcaagaccgtgcccgatgcctggctggaggtgacgatcaccgagggccgc
aaccgccaggtacggcgcatggtggcgcatgtgggcctgccctgcctgcggctggtgcgc
tggtcggtgggcgactggacggtcgccgggctggcacccggagaatggcgcgcgctctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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