KEGG T02330: PAC1

Cutibacterium acnes C1: PAC1_06550

Entry

PAC1_06550        CDS       T02330

Name

(GenBank) transcription termination factor Rho

K03628

transcription termination factor Rho

Organism

pacc Cutibacterium acnes C1

Pathway

pacc03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:pacc00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PAC1_06550
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pacc03021]
    PAC1_06550
   03019 Messenger RNA biogenesis [BR:pacc03019]
    PAC1_06550
Transcription machinery [BR:pacc03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PAC1_06550
Messenger RNA biogenesis [BR:pacc03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PAC1_06550

SSDB

Motif

Pfam:

Rho_RNA_bind ATP-synt_ab Rho_N Spore_III_AA NACHT AAA_22 AAA_25 AAA ResIII

Other DBs

NCBI-ProteinID:

AFU41063

Position

complement(1363377..1365278)

AA seq 633 aa
MTQTSQPDGSLDLSTKLLPELRSIATQMGIKGARGMRKADLIAAISEGGYPGVGRPAERQ
NRGQESGTSSDEGRQQRTQRRRRAEASEDSEFNKSAGGKKTPSVGDLLDAAEAQKQAETA
KKPDDQDPGQQDGGADRPGRERGDRSRRGDSPRRRARNTSRENFNSNSGDSNINDEVGAR
LEALSRGQRGERNQSDRGPQHDHNNDSSVDSDDEYGRFSEYGNGGRRSRRRRQRDRQNRR
KRSNDRYSDSEPNVREDDVLVPCSGILDIRDQYAFVRTSGYLPGANDAYVSMAIVRRHRL
RKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVDPEQMKQRPEFSKLTPLYPQERLRLE
DDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDE
RPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELAIERAKRLVELGHDVVILLDGITRLG
RAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVI
FEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLE
GSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD

NT seq 1902 nt +upstreamnt +downstreamnt
gtgactcaaacctcacagccggatggatccttggatctgtccactaagttgctccccgag
cttcgttctatcgctactcagatgggaattaagggagctcgtggtatgcgcaaggctgac
ctcatcgcggctatctctgaagggggatatccgggagtcgggaggccagctgagcgtcag
aatcgcggtcaggaatccggtacttctagtgatgagggccggcaacagcgcacccagcga
cgccgtcgcgcggaggcttctgaggactccgaattcaataaatctgcaggggggaagaaa
actccgtcggtaggcgacctactcgacgccgccgaggctcagaaacaagcggaaacagcc
aagaaacctgacgaccaagatccgggtcagcaggatggcggagctgatcgcccgggccgt
gagcgcggtgaccgcagtcgtcgaggcgattcacctcgacgacgagcccgcaatacctca
cgagaaaatttcaacagcaattctggcgacagcaacatcaacgacgaggttggtgcccgg
cttgaagcgctgtctcgcggtcaacgcggtgaacgcaaccagtccgatcgtggccctcaa
catgatcacaacaacgactcttctgtcgattccgacgacgagtacggtcggttctcggaa
tacggcaatggcgggcgacgttctcgccgccgtcgccagcgtgaccgtcaaaaccgtcgc
aagcgttctaacgaccgctactccgattcagaaccgaatgtgcgtgaggacgacgtcctt
gtcccgtgctcgggcatcctcgacattcgtgaccagtatgcctttgtgcgcacttcggga
tatcttcctggcgccaatgatgcctatgtctcgatggctatagtgcgtcggcaccgcctg
cgcaaaggcgacgtcatcgtcggtcagatgcgtgctcatcgcgaaggggagaggcgtgaa
aagttcgcgccgctggtcaaaatcgagcaggttaatggtgttgatcccgagcagatgaag
cagcgtccggagttttctaagctcactccgctgtatccgcaggaacgtctgcgtctcgag
gacgaccccaaaaacatgactgggcggatcatcgatctcgtcagtccgattggtaaaggc
cagcgcggtctcatcgtttcgcctccaaaggctggcaagacgatgatcatgcaatcgatc
gcaaactcgatcactcgcaataaccccgaagttcacctcatggtggtgttggtcgacgag
cgccccgaggaggtcactgacttccagcgcactgtcagcggcgaggtcgtcgcatcgacc
ttcgaccgccctgctgacgaccatactcagctgtccgagctggccatcgagcgtgccaaa
cgtctcgtagagcttggtcacgacgtcgtcatcttgctggacggcatcactcgtctggga
cgtgcgtacaacttggccgcccctgcttccggtcggatcctttccggtggtgtcgactca
gctgccctgtacccgccgaagaagttctttggcgctgctcgtaatatcgaacacggtggg
tccctgacgatcctcgccaccgctctggttgagaccgggtcgaagatggacgaggtgatc
ttcgaggagttcaaaggcactggcaatatggagttgcggctccgtcgcgaatttgccaat
aagaggctgttccctgctatcgacgttgacgcatccggtacccgtcgcgaggaattgctg
ctgtcgcgcgaggagacagcgattatgtggaagctgcgcagagtgctgtctggtctggaa
ggctcccaggctctcgaaatgatgctttcgcggctgcgtaagacccagacgaacgtggag
ttcttgtacaccatttcgaagacgaccccgaaccaggattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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