KEGG   Propionibacterium acidifaciens: EGX94_02405
Entry
EGX94_02405       CDS       T05713                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pacd  Propionibacterium acidifaciens
Pathway
pacd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pacd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EGX94_02405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pacd03400]
    EGX94_02405
DNA repair and recombination proteins [BR:pacd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EGX94_02405
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EGX94_02405
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 AAA_29 SMC_N Zn-ribbon_8 AAA_16 AAA_25 ATPase DnaJ_CXXCXGXG BCA_ABC_TP_C DZR AAA_22 MobB Anti-TRAP zinc_ribbon_2 DUF463 RecA cobW zinc-ribbons_6
Other DBs
NCBI-ProteinID: AYW77078
UniProt: A0A3G5HNA6
Position
complement(549691..552267)
AA seq 858 aa
MSRNPGGAGRGRAPDRTAVRGARVHNLKDVDVDVPLNEFVGIAGVSGSGKSSLALGVLYA
EGSRRYMDALSTYTRRRIGQASRAQVDEVRHVPAALALRQRPAVPGVRSTFGTATELLNH
LRPLFSRTGAYTCPHCGAEVPPGMNEARMVPYTCPACGTAFDGLGAEQLAFNSEGACPTC
GGTGVTRVVDESTLVPDESISIDDGAVAPWGTLMWDLMKQVCGACGVRTDVPFNRLTQEE
RDIVLHGPAEKRHILYRAKKGDTFAEMDFTYYNAVRTVENALSKVKDEKGMRRVEKFLTV
GPCADCGGTRLNERARSMTVRGIDLAQATALTLDELADWVRGVPASLPDEVRPMAVAILD
EMTEPMERLQQLGLGYLSLDRAGVTLSTGELQRVQLSRAVRNRTTGVLYVLDEPSIGLHP
ANVDGLLGVVDDLLADGNSVVVVDHDVRVLRRADHLIEVGPASGADGGRIIAQGTVAEVG
RNPASRIAPFLTGERTVRVRSRVPTAEMFAAGSIDLTTGPLHTVGPLEVRIPRGRLTAVT
GVSGSGKTTLVLESLVPALKASAAGEPLPAHVRSVAADGIGRARIIDAAPIGVNVRSTVA
TYSGVLDELRRAFARTEDARARGLRAGDFSYNTGALRCPTCDGTGTITLDVQFLPDVDVP
CPDCGGARYAEEAGRVRRPVKRAKDAATGAPGSRARAVPEAVSLPELMACTVDQALVLTR
GMRTVTARLRTLHDLGLGYLTLGEATPALSGGEAQRLKLAGELGRRQDDALLVFDEPTIG
LHPLDVGTLLGVLDGLARNGATVVVVEHDLDVIADADWVVDMGPGGGGAGGAVVCAGTPE
DVAANPASVTGRYLGQEL
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgagtcggaaccccggtggagccgggcgcggacgcgcgccggaccggacagcggtgcgc
ggtgcgcgcgtccacaacctcaaggacgtcgacgtcgacgtcccgctcaacgagttcgtc
ggcatcgcgggcgtgtcgggctcgggcaagtcgagcctggcgctgggcgtgctctacgcc
gagggctcgcgccgctacatggacgcgctctccacctacacgcgccgacgcatcgggcag
gcgagcagggcgcaggtcgacgaggtgcggcacgtgccggcggcgctggcgctgcggcag
cggcccgcggtgccgggcgtgcgctcgaccttcggcaccgcgaccgagctgctcaaccat
cttcgtccgctcttcagccgcacgggcgcctacacctgcccccactgcggcgccgaggtc
ccaccgggcatgaacgaggcccggatggtgccctacacctgccccgcctgcgggacggcc
ttcgacggcctgggcgccgagcagctcgcgttcaactccgagggcgcctgccccacctgc
ggcgggacgggcgtcacgcgtgtcgtggacgagtccacgctcgtgcccgacgagtcgatc
tccatcgatgacggcgccgtcgccccgtggggcaccctcatgtgggatctcatgaagcag
gtctgcggcgcgtgcggggtgcgcaccgacgtgccgttcaaccggctcacgcaggaggag
cgcgacatcgtcctccacggcccggccgagaagaggcacatcctctaccgggcgaagaag
ggcgacaccttcgccgagatggacttcacctactacaacgcggtccgcaccgtggagaac
gcgctctccaaggtcaaggacgagaagggcatgaggcgcgtcgagaagttcctcacggtg
gggccgtgcgccgactgcggcggcacgcgcctcaacgagcgggcccgttcgatgacggtg
cgcggcatcgacctggcgcaggccaccgcgctcaccctggacgagctggccgactgggtg
cgcggcgtgcccgcgtcgctgcccgacgaggtgcgccccatggcggtcgcgatcctcgac
gagatgaccgagccgatggagcgcttgcagcagctggggctgggttacctctcgctcgac
cgcgccggcgtcacgctctcgaccggcgagctccagcgcgtgcagctctcgcgggcggtg
cgcaaccgcacgaccggcgtgctctacgtgctcgacgagccctcgatcggcctgcacccc
gccaatgtcgacggcctgctgggcgtggtggacgatctgctcgccgacggcaactcggtc
gtggtggtggatcacgacgtgcgcgtgctgcgccgggcggaccatctcatcgaggtcggg
ccggcctccggcgccgatggcgggcgcatcatcgcgcagggcaccgtggcggaggtcggg
cggaacccggcgtcgcgcatcgccccgttcctcaccggcgagcgcacggtgcgcgtgcgc
agccgcgtccctaccgccgagatgttcgccgcgggatcgatcgacctgaccacggggccg
ctgcacaccgtcgggccgctcgaggtgcgcatcccccgcgggcggctcacggcggtcacg
ggcgtctcgggctcgggcaagacgacgctcgtgctggagagcctggtcccggcgctgaag
gcgagcgcggcgggcgagccgctcccggcgcacgtcaggagcgtggcggccgacggcatc
ggacgggccaggatcatcgacgccgcgcccatcggggtcaacgtgcgctcgaccgtggcc
acctactcgggcgtgctcgacgagctgcgccgcgccttcgcgcgcaccgaggacgccagg
gcgcgcggcctccgggcgggggacttctcgtacaacaccggcgccctgcgctgcccgacg
tgcgacggcacgggcaccatcacgctcgacgtgcagttcctgcccgacgtggacgtcccg
tgccccgactgcggcggtgcgcgctacgcggaggaggcggggcgggtgcgccgaccggtc
aagcgcgcgaaggacgctgcgacgggcgcccccgggtcccgtgcgcgcgccgtccccgag
gcggtctcgctgcccgagctcatggcctgcaccgtcgaccaggcgctcgtgctgacgcgg
ggcatgcgcacggtgaccgcgcgtctgcggacgctccacgacctggggctcggctatctc
acgttgggcgaggccacgccagcgctctcgggtggcgaggcgcagcggctcaaactcgcc
ggtgagctcggcagacgccaggacgacgcgctcctcgtgttcgacgagccgaccatcggc
ctgcacccgctcgatgtggggacgctgctcggggtgctcgacggcctcgcgcggaacggc
gcgacggtcgtggtcgtcgagcacgacctcgacgtgatcgccgacgccgactgggtcgtg
gacatgggccccggcggcggcggggcgggcggcgccgtcgtctgcgcgggcacgccggag
gacgtggccgcgaacccggcgagcgtgacggggcgctatctcgggcaggagctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

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