KEGG   Propionibacterium acidifaciens: EGX94_06545
Entry
EGX94_06545       CDS       T05713                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pacd  Propionibacterium acidifaciens
Brite
KEGG Orthology (KO) [BR:pacd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pacd03032]
    EGX94_06545 (gyrB)
   03400 DNA repair and recombination proteins [BR:pacd03400]
    EGX94_06545 (gyrB)
Enzymes [BR:pacd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     EGX94_06545 (gyrB)
DNA replication proteins [BR:pacd03032]
 Prokaryotic type
  DNA Topoisomerases
   EGX94_06545 (gyrB)
DNA repair and recombination proteins [BR:pacd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EGX94_06545 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: AYW77778
UniProt: A0A3G5HQF6
Position
1569025..1571070
AA seq 681 aa
MSEELNEDVDPETADSTPAGGDDIVLTESADDSVDGDYGASEIQVLEGLEAVRKRPGMYI
GSTGERGLHHLVYEIVDNAVDEALAGYCSTIRVELLDGGGCRVSDDGRGIPVTEHPVEHI
SSLTLVLTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSERFRADVRRDGYHWAQDYVLG
EPTGPVERLESSTTTGTTITFHPSAEIFETTNFSFETLATRFREMAFLNKGLQIEITDLR
AGHVDEDGSPLHEVFRFDRGLVDYVNYLNGSREALSPVIDVEAHSAELGMGVEVAMQWNS
GYTTSLHTFANAINTQEGGTHEEGFRTALTTTVNKWGEAWGLIKKREDRVSNDDIREGLT
AIVSVKLVEPQFEGQTKTKLGNTEARGFVQRAVNERLGDWMERNPGEGKEIVRKAQAAAS
ARIAARKARDMARNRKGLLGSSALPGKLADCSSNEPGECEIFIVEGDSAGGSAKGGRNPR
TQAILPLRGKILNVEKARVDRALQSDTIEAIINALGTGVHEEFDINKLRYHKIVLMADAD
VDGAHIRTLLLTLLFRFMPALIEGGYVYLAQPPLFRLRWTNSPHELAYSDAERDALRDAG
LTAGKKLPNVNPIQRYKGLGEMDAQDLWSTTMDPDNRILLQVSIDDAAQADQMFQILMGE
DVEQRRRFIQRNAKDVRFIDA
NT seq 2046 nt   +upstreamnt  +downstreamnt
gtgagcgaagagctgaacgaagacgtcgaccccgagacggccgactccacccccgccggc
ggcgatgacatcgtcctgacggagagcgccgatgactcggtcgacggcgactacggcgcc
tcggagatccaggtcctcgagggcctcgaggccgtccgcaagcgccccggcatgtacatc
ggctccacaggggagcgcggcctgcaccacctcgtctacgagatcgtcgacaacgccgtg
gacgaggccctggccggctactgctcgaccatccgggtcgagctcctcgacggcggcggc
tgccgcgtcagcgacgacggccgcggcatcccggtgaccgagcaccccgtcgagcacatc
agctcgctgaccctcgtgctcaccgtcctgcacgccggggggaagttcggcggcggcggc
tacaaggtctccggcggcctgcacggcgtgggttcctcggtcgtcaacgccctgtccgag
cgcttccgcgccgacgtccgccgcgacggctaccactgggcgcaggactacgtgctcggc
gagcccaccggcccggtcgagaggctcgagagcagcacaacgaccggcacgacgatcacc
ttccacccgagcgccgagatcttcgagaccacgaacttcagcttcgagaccctggccacc
cgcttccgcgagatggccttcctcaacaagggcctgcagatcgagatcaccgatctgcgc
gctggccacgtcgacgaggacggctccccgctgcacgaggtcttccgcttcgaccgcggc
ctggtcgactacgtcaactacctcaacggcagccgcgaggccctctccccggtcatcgac
gtcgaggcccactctgccgaactcggcatgggcgtcgaggtggcgatgcagtggaactcc
ggctacacgacgagcctccacaccttcgcgaacgccatcaacacccaggagggcggcacg
cacgaggagggcttccgcaccgccctgaccaccacggtcaacaagtggggcgaggcctgg
ggcctcatcaagaagcgcgaggaccgcgtctccaacgacgacatccgcgagggtctcacc
gccatcgtctcggtcaagctcgtcgagccgcaattcgagggccagacgaagaccaagctc
ggcaacaccgaggcccgcggcttcgtccagcgggccgtcaacgagcggctcggcgactgg
atggagcgcaatcccggagagggcaaggagatcgtccgcaaggcgcaggccgccgccagc
gcccgcatcgccgcccgcaaggcgcgcgacatggcccgcaaccgcaagggcctgctcggc
tccagcgcgctgcccggcaagctcgccgactgctccagcaacgagcccggcgagtgcgag
atcttcatcgtcgagggcgactcggccggcggctccgccaagggcggccgcaacccgcgc
acccaggcgatcctcccgctgcgcggcaagatcctcaacgtcgagaaggcccgggtcgac
cgggccctccagtcggacaccatcgaggccatcatcaacgccctcggcaccggcgtgcac
gaggagttcgacatcaacaagctgagataccacaagatcgtcctcatggccgacgccgac
gtcgacggcgcgcacatccgcacgctgctgctcacgctgctcttccggttcatgccggcc
ctcatcgagggcggctacgtctacctggcccagccgccgctgttccgactgcgctggacg
aactcgccccacgagctcgcctactccgacgccgagcgcgacgccctgcgcgacgcgggc
ctgacggccggcaagaaactgcccaacgtcaacccgatccagcgctacaagggcctcggc
gagatggacgcccaggacctgtggtccaccacgatggacccggacaaccgcatcctgctc
caggtgagcatcgacgacgccgcccaggccgaccagatgttccagatcctcatgggggag
gacgtcgagcagcgccggcgcttcatccagcgcaacgccaaggacgtccgtttcatcgat
gcgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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