KEGG   Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_01025
Entry
TIIST44_01025     CDS       T01972                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pad  Cutibacterium acnes subsp. defendens ATCC 11828
Brite
KEGG Orthology (KO) [BR:pad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pad03019]
    TIIST44_01025
   03009 Ribosome biogenesis [BR:pad03009]
    TIIST44_01025
Messenger RNA biogenesis [BR:pad03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TIIST44_01025
Ribosome biogenesis [BR:pad03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    TIIST44_01025
SSDB
Motif
Pfam: RNase_T LexA_DNA_bind Rv2179c-like
Other DBs
NCBI-ProteinID: AER04734
Position
217552..218169
AA seq 205 aa
MKDMLVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPESQWLDHMNDFVR
DMHTTSGLLAELDKGLTMTQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLVKDMPKL
ESYVHYRNVDVSSIKELARRWYPRAFGHSPQKQGNHRALADIQESIEELMYWREVIMVPS
PGPETTRCDEIAAKYQGFLTGAGRD
NT seq 618 nt   +upstreamnt  +downstreamnt
gtgaaagacatgctggtgtggatcgattgcgagatgaccgggctcgacctggcccacgac
gggctcatcgaggtggccgcactggtcaccgatggacagctcaacgtccaaggcgagggg
gtggacgtcatcatcaagcccgagtcccagtggctcgaccacatgaatgatttcgtgcgc
gacatgcacaccacatccggcctccttgcggagctcgacaaaggactgacgatgacgcag
gcccaggatcaggtgctcgactacatccgtacctacgtcccgcaggccggtaaggcgccg
ttagctggcaacaccatcggcaccgaccgctccttcctggtcaaggacatgcccaaactc
gagtcctacgtgcactatcgcaacgtcgacgtctcctccatcaaggaactggcacgacgc
tggtacccgcgcgcattcgggcactccccgcagaagcagggcaaccaccgagcgctcgct
gacatccaggaatccattgaggagctcatgtactggcgcgaggtcatcatggttccctcc
cctgggccggagaccacacgttgtgatgagatcgccgccaagtatcagggcttcctcacc
ggggccgggagagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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