KEGG   Candidatus Pseudomonas adelgestsugas: C3B55_00311
Entry
C3B55_00311       CDS       T05857                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pade  Candidatus Pseudomonas adelgestsugas
Pathway
pade00740  Riboflavin metabolism
pade01100  Metabolic pathways
pade01110  Biosynthesis of secondary metabolites
pade01240  Biosynthesis of cofactors
pade02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pade00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    C3B55_00311 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C3B55_00311 (ribD)
Enzymes [BR:pade01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     C3B55_00311 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     C3B55_00311 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QAX81666
Position
527641..528780
AA seq 379 aa
MNLPTTEQSVIDSHYMARALELARKGLYTTHPNPRVGCIIVHDGHIIGEGWHERTGEPHA
EMHALRTTGDKACGSTVYVTLEPCSYHGHTPPCVHALVTAGVARVVAGTLDPNPKVAGRG
LQRLAKAGIDIHSGVLEKEARALNPGFFKRMKYGLPFVRVKLAMSLDGRTAMANGKSQWI
TGPATRSAVQRLRAEASVVLTGADTVLVDGARLVVCATELGLDEATTALAMSRLPIRVLI
DGRLRVPLNAPFFKAGPALVVTCVPSENQFLRGDHEYLVVPCLNGYVDLHSALVALAARD
VNEVLVEAGASLAGAFAQQDLVDEYVIFIAGKFLGSTARPLLDWPLEKLADAPRLKITRV
RAIGDDWRITAMPVRIVSI
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaatctaccgactaccgaacaaagcgtcatcgactcccattatatggctcgtgctctc
gagttagcacgtaaaggcttatataccacccatccaaacccacgggtgggctgtatcatt
gtacatgatggacatattatcggcgaaggttggcatgaacgtaccggtgaaccacatgct
gaaatgcatgccttacgcactactggtgataaggcatgcggatctacagtgtacgtaact
cttgaaccgtgtagctatcatgggcacaccccgccatgtgttcatgcgctagttactgct
ggtgtcgcgcgagtggtagctggtacgctcgacccaaatccgaaagtggctggtcgcggg
ctacagcgattagctaaagcaggtattgacatccatagcggtgtactggaaaaagaagcg
cgcgcgctgaaccctggtttttttaagcgcatgaaatacggcctgccatttgtacgggtc
aagttagcgatgagtttagatggtcgcaccgcgatggctaacggcaaaagccaatggatt
accggccccgctaccagatctgcagtgcagcgtttgcgcgcagaggctagtgtagtgttg
accggtgccgacacggtgcttgtcgatggagctcgcttggttgtatgtgctacagagtta
ggccttgacgaagccactactgcacttgcaatgtcacgtctaccaatacgcgtattgatc
gacgggcgtttgcgggtgccgcttaacgcgccgttttttaaagctggaccagctttggtt
gtcacctgtgtaccgtcggaaaaccagttcctacgcggtgatcatgaatacctagtagtt
ccttgtctcaacgggtatgttgatctgcattcagccttagtagcactggctgcccgtgac
gttaatgaagtgttggtggaagctggggcaagcctagctggtgcatttgctcagcaggat
ttagtggacgagtacgttatatttattgctggtaagttcctaggctccactgccaggcct
ttgctggattggccgcttgagaaactggctgatgctccacggctcaagattaccagagtg
cgtgctataggcgatgattggaggataaccgccatgcctgtgcgaatagtgagtatataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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