KEGG   Pygoscelis adeliae (Adelie penguin): 103915757
Entry
103915757         CDS       T06012                                 
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
padl  Pygoscelis adeliae (Adelie penguin)
Pathway
padl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:padl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103915757 (CNOT6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:padl03019]
    103915757 (CNOT6)
Enzymes [BR:padl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     103915757 (CNOT6)
Messenger RNA biogenesis [BR:padl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103915757 (CNOT6)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103915757 (CNOT6)
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1 LRR_6
Other DBs
NCBI-GeneID: 103915757
NCBI-ProteinID: XP_009320945
Position
Unknown
AA seq 544 aa
MYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSDNSLSRIPSDIAKL
HNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLT
QDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMC
YNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYSFFLVE
LKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS
EAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDYSDVKL
VQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSGVVEYLSTGGVETN
HKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYI
FYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFLPPVNGIHL
PGRR
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgtacacaattatgtcctcagaggaagcagccaacggaaagaaatcacactgggcagag
ttggaaataagtgggaaagtgagaagcttaagttcgtcattgtggacactgacccatttg
acagctttgcatctcagtgacaattccttatcccgtattccttcagacattgctaagctt
cacaatctggtatatctggacctgtcctctaataaaattcgcagtttaccagcagagctc
ggaaacatggtgtcactcagggaactacatttaaataacaacctgttacgagttttacct
tttgagctgggaaaactgttccagttacagactttgggtctgaaaggaaatccacttaca
caggatattctgaacctttatcaggaaccagatgggacgcgcaggctactgaactatttg
cttgataatttggcaggtactgcaaaaagaatttcaacagaacaaccacctccaagatct
tggattatgttgcaagaaccagaccgtacaagaccaacagccttgttttctgtcatgtgt
tacaacgtgctctgtgataaatatgctacccggcagctgtatggctattgtccatcttgg
gcattgaactgggaatacagaaaaaaagccattatgcaggaaatcctgagctgcaatgct
gacatcataagtcttcaggaggtcgaaacggaacagtactacagttttttcctggtagaa
ttgaaagaacgtggctacaatggattcttcagtccaaaatctagagctaggacaatgtca
gaacaggaaagaaaacatgtcgatggttgtgcaatatttttcaaaacagaaaaatttact
ttggttcaaaaacatactgttgagttcaatcaactagctatggcaaactcagaaggttca
gaagctatgctgaacagagttatgacgaaagataatattggcgttgctgtattgttagaa
ctgcgaaaggaattgatagaaatgtcatctggaaagccacatcttgggatggaaaagcag
ctagttcttgtagctaatgcacatatgcattgggacccagattattctgatgtgaagctg
gttcagactatgatgttcctgtccgaggtaaagaacattattgataaagcctctcgtagt
ctcaaacctggtgtttcgggagaacttggaaccattccacttgtactgtgtgcagatctc
aattctctgccagactctggtgttgttgagtacttgagcactggtggggtggaaacaaac
cacaaagattttaaggaactgagatacaacgaaagtcttactaacttcagctgtaatggg
aaaaatggaacaacaaatggaagaattacacatggtttcaagttgaagagtgcctatgag
aacggtctaatgccttatacaaattacacatttgacttcaagggtattattgactacatc
ttctactctaaacctcagctaaacatacttggcattcttggacctttggatcatcattgg
ttaatagagaacaatataagtggttgtccacatccactcatcccttctgaccacttctca
ctttttgcacaactggagcttttgctgcctttcctgcctcctgtaaatggaatccatctc
cctggcaggaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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