KEGG   Pygoscelis adeliae (Adelie penguin): 103917905
Entry
103917905         CDS       T06012                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
padl  Pygoscelis adeliae (Adelie penguin)
Pathway
padl04510  Focal adhesion
padl04512  ECM-receptor interaction
padl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:padl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103917905 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103917905 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103917905 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:padl04147]
    103917905 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:padl00536]
    103917905 (COL4A4)
Exosome [BR:padl04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103917905 (COL4A4)
Glycosaminoglycan binding proteins [BR:padl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103917905 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103917905
NCBI-ProteinID: XP_009323390
Position
Unknown
AA seq 1685 aa
MALTKYSFERLKWLITAAWWLLIVFSAPEIDGGGYAYIDPCGGQDCSVCQCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVSGFPGLDGVPGL
PGSEGPRGKRGLDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGEKGNAVYISHFGKGPP
GDRGDPGPPGMPGPRGSRGTTGPSGYPGQPGMPGIPGYPGLPGEQGNPGIGVDGQKGEPG
NVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGVTGYRGPRGPKGIPGRGEKGEKGISGF
PGLPGNPGSYGPAGFPGVKGETGFAGVPGQPGYPGIQGDPGEKGPPGPPGAVGTPLLPIK
GPQGDPGFPGPAGDLGSAGPIGPTGLLGRPGDDGTSLPGLPGVSGAPGPQGFQGDPGFPG
TGESIPGRPGFPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGEKGE
KGNQGLCSCSAGPPGPRGMQGPPGTQGNKGQMGYPGRHGEKGDPGLSGAMGSPGLPGTPG
SAGEHGEKGEKGDPGRVRIKGIKGERGPAGVPGFPGQRGNDGRDGELGLPGEKGAEGDSG
VPLLGDKGFPGVRGLPGVKGQMGLPGLGFPGPPGIRGSPGDFGDTGNVGPPGPKGQKGET
VCITLPYPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGHRGRPGAGIPGPEGFRGK
VGDPGDEGERGSTVDGKNGPPGPPGMDGQKGVPGDTTYGPPGIPGNRGPQGPPGAQGARG
DPGSGLQGKPGTPGFPGAKGFRGPEGDIGAPGCPGFPGPPCDTGLPGPPGVRGVMGLPGR
QGLPGFKGQRGDRGLAGPPGIKGLKGFPGSRGPPGPPGSRGLPGLPGDKGPPGFPGQTGS
KGIQGPQGFPGVPGTQGPMGISGVKGEEGKVGPPGPSGERGDTGIKGESGPPGDSGCVNI
RLEKGQKGESGFPGENGFRGEGGEKGNTGFRGTPGFPGKNGLPGLPGDHGDTGLMGFPGS
RGFPGPKGFKGIMGFQGQPGDQGDVGLPGIPGNPGLTGPKGSKGKRGDPTPLLGTHGRKG
PPGDPGLPGLCGLPGEKGSPGIQGQPGRPGSKGDPGYPGIPGFPGVTGPQGLPGEPGEKG
KHGIWGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYSGELGP
KGDRGEPGWPGISIPGPPGERGFPGFPGRKGPVGPTGPTGRSPDSASPGPPGDQGPPGLD
GIRGQPGNPGPPGETIFVRGDPGDTGIRGAPGNPGRRGQQGARGLPGNQGRGGPKGPMGI
HGPQGPPGAVGQPGDQGFRGKPGPKGPTGTYEPVAHCDPGEPGKIDDSCPAIPGPPGEAG
QRGDDGSVGLAGPIGHPGPQGRKGEEGSCGLPGQDGLPGAPGPPGDQGNIGEQGYAGPQG
PPGQTGIPGPPGPRISSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQ
DLGLAGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPTTPLSEEEIQPYISR
CAVCEAPAQAVAVHSQDQSIPSCPVNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLED
FRSAPFIECQGQRGTCHFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQV
CLKHG
NT seq 5058 nt   +upstreamnt  +downstreamnt
atggcattaacaaagtattcgtttgaacggcttaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcagcaccagaaattgatgggggaggatatgcatatattgaccca
tgtgggggacaggattgttcagtttgtcagtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccgattgggtccttgggatctacaggaccagctggt
ctgccgggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtctcaggatttcctggtttagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaagcgtggtttagatggctgcaacggctcaagagga
gatccaggatttccaggcgaaaatggttatattggaccgagaggtccttatggaaatccg
gggcaaaaaggagaaaaaggaaatgcagtgtatatttcacattttggaaaaggacctcca
ggagacagaggtgatcctggaccccccggcatgcccggacctagagggtcaagaggtaca
acaggcccatctggatacccaggccaaccaggcatgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggatggacaaaagggggagccgggc
aacgttggacttcctgggccacctgggtcaccactgttagttgggcctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggggtaacaggatacagagggcca
cgtggacccaaaggtatacctgggagaggagaaaagggtgaaaaaggcatttctggattc
cctggattgccgggtaatcctggttcttacggacctgcaggttttcctggagtgaagggg
gaaacaggatttgctggtgttcctggacaacctggctatccaggcatacagggggatcca
ggagaaaaagggcccccaggtcctcctggagctgttggaactccgctgcttcctataaaa
ggtcctcaaggagatcctggatttccaggtcctgctggtgatctggggtcagctggacca
attggtcctacaggcctgctaggaagaccaggagatgatggaacaagtctgcctggcctg
ccaggagtaagtggggcaccaggacctcaaggttttcaaggtgaccctggtttccctgga
acaggtgaatcaatcccaggaagacctggatttcctggaccaccaggcctaccaggacag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgacagagggatccct
ggagaacctggagcaaaaggtcagataggccttccgggaagaaaaggtgaaaaaggagaa
aagggaaatcaaggcctttgctcatgtagtgctggtcctcctggtccccgtggtatgcaa
ggacctccaggtactcaaggaaacaaaggacaaatgggataccctggaagacacggagaa
aagggcgatccaggcttatctggtgcaatgggatcaccagggctccctgggacacccggt
tctgctggagaacatggtgaaaaaggagagaagggtgatccaggaagagttagaataaaa
ggaataaaaggtgaaagaggtcctgctggggttccaggatttccaggccaaaggggtaat
gatggcagagatggggaactaggattgcctggggaaaaaggagctgagggtgattctgga
gtaccactgctgggtgataaaggattccctggggttcgaggacttcctggggtaaaagga
cagatgggattgcctggtttggggtttcccggccctccaggaatcagaggtagccctgga
gactttggcgatactggtaatgttgggccacctggtccaaagggccagaaaggtgagacc
gtctgcattacattaccataccctggaaatccaggtccccctggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactccccggtcgtcctggaccaaatggctttgatggtcaa
aaaggccatcgaggcaggccaggtgcaggaatccctgggccagaaggctttcgaggcaaa
gttggtgatcctggtgatgaaggtgaaagaggatctacagttgatggtaaaaatgggcct
ccaggtccacctggcatggatggtcagaaaggtgttccaggtgataccacatacggtcct
ccaggaatcccaggcaacaggggaccgcaaggaccccctggtgcacaaggagcaagaggt
gatccaggttctgggcttcaaggaaagcctggtaccccaggatttccaggcgccaaaggc
tttagaggcccagaaggtgatataggagcaccaggctgtccaggcttccctggtccacca
tgtgacacgggcttaccagggccaccaggagtcagaggtgtcatgggcctgccaggacgt
caaggcttaccaggctttaaaggtcagaggggagacaggggcttagctgggccacctgga
atcaaaggtctcaaaggctttcctggctcacgaggtcccccaggtcctccaggctcacga
ggtcttccaggacttccaggcgataaaggaccacctggtttcccaggacaaacgggaagc
aaagggattcaaggaccccaaggattcccaggagtcccaggaacacaaggcccaatggga
atctccggtgtaaaaggtgaagaaggaaaagtgggtccacctgggcctagtggagaacgt
ggggatacgggaataaaaggtgaaagcgggcctccaggagacagtggctgcgttaacatc
cgtcttgagaaaggacaaaagggggaatcagggtttcctggtgagaacggatttagaggt
gaaggaggtgaaaaaggcaatactggtttcagaggcaccccaggatttccagggaagaat
ggtctcccaggactgccaggtgaccatggtgacactggactgatggggtttccaggatca
cggggtttcccaggaccaaagggctttaaaggaattatgggttttcaaggacaaccaggt
gaccagggtgatgttggcttaccgggaatccctggaaatccaggactgactggcccaaaa
ggatctaaaggcaagagaggtgacccaactcctctgcttggtacacatggtcgaaaaggg
cctcccggagatccaggattaccaggactctgtggactcccaggagagaagggttcacca
ggtatccaagggcaacctggaagaccaggatccaagggtgaccctggatacccaggaata
ccgggatttccaggagttacaggtcctcagggattgccaggagagcctggagaaaaaggg
aaacatggaatttggggacctccaggattgcaaggattagctggatcccaaggcagaaaa
ggtcttcctggactgcccggactggatggcttggatggactaaaaggtcaaaaaggttct
gcaggagctccaggtcaaagtgaaacagggcccccaggatactcaggagaacttggacca
aaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctggagaa
aggggattcccaggattcccaggtagaaaaggacctgttggacccactggacctacggga
agatctcctgatagtgcttctcctggtcctccaggtgatcaaggaccacctggtttagat
ggcatcagaggtcagcctgggaatcctggtcctcctggagagactatctttgtgcgagga
gatccaggtgataccggtattcgaggggcaccaggtaatcctgggcggcgagggcaacaa
ggagccagaggtcttccagggaaccaaggaagaggaggaccaaagggtcctatgggaatc
catggcccacagggcccacctggtgctgtaggacaaccaggagaccaaggttttcgggga
aaacctggtcccaaaggtcccacaggtacttacgaacccgttgctcattgtgaccctggt
gaaccaggaaaaatagacgattcatgccctgcaatcccagggcctcctggggaagcaggg
caaagaggagatgatggctctgtaggattagcagggccaataggccaccccggtccccaa
ggaagaaaaggtgaagaagggtcgtgtggcctgccaggtcaagatggcttacctggggca
cctggaccaccaggtgaccaagggaatataggagagcaaggatatgccgggccacaaggt
ccacctggccagactggtatcccaggaccaccaggcccccgtattagctctgcaagtgga
ttcttgctcgtccttcacagtcagtcggatagagaaccactctgtccacaggggatgcca
aaattatggactggctatagtctactgtacctggaaggacaagagaaagctcataaccaa
gatctggggctggcaggatcttgtcttcctgtgtttaataccatgccctttgcttactgt
aatatcaaccaagtttgttactacgccagtcgaaatgataagtcttactggttgtcaagt
gctgctcctttaccaacgacgccactctctgaagaagaaatacaaccatatataagcaga
tgtgctgtatgtgaggccccagcccaagcggtagcagttcacagccaagatcagtcgatt
ccttcctgcccggtgaactggaggagtctttggataggatattcttttttgatgcacact
ggatctggtgatcagggcggtggacagtcccttatgtcacctggaagttgcctagaagac
ttcagatcagcaccattcattgaatgccaggggcagcggggaacgtgtcatttttttgct
aacgaatacagtttctggctaacaaccgtgatgcccgaattgcagtttgcatcagccccc
ctgtcaggaactcttaaagaaggacaagagcagaggaaaaaaatcagtagatgccaggta
tgcctgaagcacggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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