KEGG   Pseudomonas aeruginosa PAO1: PA0085
Entry
PA0085            CDS       T00035                                 
Symbol
hcp1
Name
(RefSeq) protein secretion apparatus assembly protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae02025  Biofilm formation - Pseudomonas aeruginosa
pae03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pae00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PA0085 (hcp1)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PA0085 (hcp1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pae02044]
    PA0085 (hcp1)
Secretion system [BR:pae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PA0085 (hcp1)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-GeneID: 879446
NCBI-ProteinID: NP_248775
UniProt: Q9I747
Structure
Position
103350..103838
AA seq 162 aa
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTK
YIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDR
LTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatatgttcatcaagatcggcgacgtcaagggtgagtccaaggacaagact
cacgccgaggaaatcgacgtgctggcatggagctggggcatgtcccagtccgggtcgatg
cacatgggcggtggcggcggcgccggcaaggtcaacgtgcaggacctgtcgttcaccaag
tacatcgacaagtccacgcccaacctgatgatggcctgctccagcggcaagcactatccg
caggcgaagctgaccatccgcaaggccggcggcgagaaccaggtcgagtacctgatcatc
accctgaaggaagtcctggtgtcctcggtgagcaccggcggcagcggtggcgaggatcgc
ctgaccgagaacgtgaccctgaacttcgcccaggtccaggtcgactaccagccgcagaag
gcggatggcgcgaaggacggcggtccggtcaagtacggctggaacatccgccagaacgtg
caggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system