KEGG   Pseudomonas aeruginosa PAO1: PA0090
Entry
PA0090            CDS       T00035                                 
Symbol
clpV1
Name
(RefSeq) secretion protein ClpV1
  KO
K11907  type VI secretion system protein VasG
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae02025  Biofilm formation - Pseudomonas aeruginosa
pae03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pae00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PA0090 (clpV1)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PA0090 (clpV1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pae02044]
    PA0090 (clpV1)
Secretion system [BR:pae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PA0090 (clpV1)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Clp_N NBD_SMAX1 Zeta_toxin Sigma54_activat nSTAND3 TniB AAA_7 ATPase_2 AAA_25 AAA_14 NACHT AAA_18 Torsin CbiA Hpr_kinase_C SRP54
Other DBs
NCBI-GeneID: 879553
NCBI-ProteinID: NP_248780
UniProt: Q9I742
Structure
Position
108221..110929
AA seq 902 aa
MSEISRVALFGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQILQLPDSDLHQIVRQS
GIDPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIG
ILKTPSLRHALTGLSAEFAKLKVEALTERFDEYVGASPENGLSASDGFNAGAAPGEASGA
LAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSS
EKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHRYIPARQLPDK
SVSLLDTACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETL
LAEERERLAALEQRWAEEKRLVDELLETRARLRAAAEAVDAGGVPLGEGEVRLDEEQRQA
LHARLAELQAQLSALQGEEPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRH
LKKRIIGQDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGG
EQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPD
VHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSL
REPLLKIFPPALLGRLVTIPYYPLSDDMLKAISRLQLGRIKKRVEATHKVPFEFDEGVVD
LIVSRCTETESGGRMIDAILTNTLLPDMSREFLTRMLEGKPLAGVRISSRDNQFHYDFAE
AE
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgagtgagatcagtcgcgttgcgctgttcggcaagctgaacagcctggcctacaaggcc
atcgaggccgccacggtattctgcaagctgcgcggcaatccctatgtcgagctggtgcac
tggttccaccagatcctccagttgccggactcggacctgcaccagatcgtccgccagtcc
gggatcgacccggcgcgcctggccaaggacctgaccgaggccctcgaccgtctgccgcgc
ggctcgacctcgatcaccgacctgtcctcccatgtcgaggaagcggtggagcgcggctgg
gtctacggcagcctgatgttcggcgagagccaggtgcgcaccggctacctggtgatcggc
atcctcaagacgccgagcctgcgccatgccctcaccgggctgtcggcggaattcgccaag
ctcaaggtcgaggcgctcaccgagcgcttcgacgagtacgtcggcgcctcgccggagaac
ggcctgtcggccagcgacggcttcaacgccggcgccgccccgggcgaggccagcggcgcc
ctggcgccgagcgcgatgggcaagcaggaggcgctcaagcgctttaccgtggacctcacc
gagcaggcccgcagcggcaagctcgaccccatcgtcgggcgtgacgaggagatccgccag
ttggtggacatcctcatgcgccgccggcagaacaacccgatcctcaccggcgaggccggc
gtcggcaagaccgcggtggtggaaggcttcgccctgcgcatcgtcgccggcgacgtcccg
ccggcgctgaaggacgtcgaactgcgcgccctcgacgtcggcctgctgcaggccggggcg
agcatgaagggcgagttcgagcagcgcctgcgccaggtgatcgaagacgtgcagagttcc
gagaagccgatcatcctgttcatcgacgaagcccacaccctggtcggcgccggtggcgcg
gccggcaccggcgacgccgccaacctgctcaagccggccctggcgcgcggcaccctgcgc
accgtggcagcgaccacctgggccgagtacaagaagcacatcgagaaggacccggcgctg
acccggcgtttccaggtggtgcaggtggacgagccgtccgagcacaaggccatcctgatg
atgcgcggcgtcgcgtcgaccatggagaagcaccaccaggtgcagatcctcgacgaggcg
ctggaggcggcggtccggctgtcgcaccgctacatcccggcgcgccagctgccggacaag
tcggtgagcctgctggataccgcctgcgcgcgcaccgccatcagcctgcacgcggtgccg
gccgaggtcgacgatagccgccgtcgcatcgaggcgctggaaaccgagctggcgatcatc
cgccgcgagagcgccatcggcgtcgccaccgccgaacgccagcgcaacgccgagaccctg
ctggccgaggagcgcgagcgcctggccgccctggagcagcgctgggccgaggaaaaacgc
ctggtcgacgaactgctggagacccgcgcccgtctgcgtgccgccgccgaagcggtggat
gccggcggcgtgccgctgggcgaaggcgaggtgcgtctcgacgaggaacagcgccaggcg
ctgcatgcgcggctggcggagctgcaggcgcaactgagcgcgttgcagggcgaagagccg
ctgatcctgccgaccgtggactaccaggcggtggcctcggtggtcgccgactggaccggc
atcccggtcggccgcatggcgcgcaacgagatcgagaccgtgctcaacctcgaccggcac
ctgaagaagcgcatcatcggccaggaccacgcgctggagatgatcgccaagcgcatccag
acttcccgcgccggcctcgacaacccgagcaagccgatcggcgtgttcatgctcgccggc
acctccggggtgggcaagaccgagaccgcactggccttggccgaggccatgtacggcggc
gagcagaatgtcatcaccatcaacatgagcgagttccaggaagcccacaccgtctccacc
ctcaagggcgccccgcccggctacatcggctacggcgagggtggcgtgctgaccgaggcg
gtgcgtcgcaagccctacagcgtggtgctgctggatgaagtggagaaggcccacccggat
gtccacgagatcttcttccaggtcttcgacaagggcgtgatggaggacggcgaaggccgg
gtgatcgacttcaagaacaccctgatcctgctcaccaccaacgccggcaccgagatgatc
gccagcctctgcgccgatccggaactgatgcccgagccggaagccatcgccaagtcgctg
cgcgaaccgctgctgaagatcttcccgccggcgctgctcggccgcctggtgaccatcccc
tactacccgctcagcgacgacatgctcaaggccatttcgcgcctgcaactggggcggatc
aagaagcgcgtggaggcgacccacaaggtgccgttcgagttcgacgagggcgtcgtcgac
ctgatcgtctcgcgctgcaccgagaccgagagcggcggccggatgatcgacgcgatcctc
accaacacgctgttgccggacatgagccgcgagttcctcacccgcatgctcgaaggcaag
ccgttggccggggtacgtatcagtagccgcgacaaccagttccactacgacttcgccgag
gccgagtga

  All links  
Gene (16)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (23)   
   Pfam (23)   
All databases (43)   

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